Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4971 ATGTCATCACGAACAATCATCTCTCCAGAGACAACGGAGCCACAAGCACCGCTTCTCCGCTCCCGCCATGAAGGCGGCGGCGGACGCGGTCCTTCCCTCGCTCAACTTCTCGGACGCGCCACCGGACGGAGAGGACCATCAGTTCTTGTCCGCGAAACGGCGGCGCGTGAACTCGAAGAGCGTCGTGCCGATTGGGGATACTCGAAACCAGTAGTAGCGCTCGACATGTCATGGAACATGGCTTTCGTTGTTGTATCGGCGGTGATGCTTGCGTTCACCGTTGACGAACGTCCGAACACGCCGATCCGCGTTTGGATCGTTGGATATGCGTTGCAGTGTTTCGTTCATGTTGTGTTGGTGTGGATTGAGTATCATCGCCGTACTCGGAGAGATTCGCGGCGAAGGCAGAGGGATAGTGATGCTGAATTCAGTTCCGATGGTAACGACAGTGATGACAGCGACGGTGATGTGAACTCCTCTCAGTCCAGATTCACCAAGCGATGTGAATCAATAAATACCGGGGTTTCATTCCTTTGGTGGATGGTGGGCTTTTATTGGGTTGTCTCTGGTGATGATATCCTTCTGCAAGATGCTCCACGCTTGTACTGGTTGGCTGTTGTCTTTTTGGCATTTGATGTCTTCTTTGCCATCTTCTGTGTTGTTTTGGCTTGCTTGATTGGTATTGCTCTCTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCGGGACAGGAAGGTGCGTCAGAAGCAGATCTTAGTATACTTCCAAAATATAGATTTCGATTATCAAACCCTGAGGAGAAGGCTAGTGGTGGAGCTGGATCAATGGTTCCCATAGAAACCACCAGTGCATACTTGGCAACTGAACGAATACTTTTACCTGAGGATGCAGAATGCTGTATATGCCTCTGTCCATATGAGGATGGAGTAGAGCTCCATACTCTTCCCTGCAACCATCATTTCCATTCTTCATGCATAGTAAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGTAAGTATAATATTCTCAAGGGAAACGAACAGGTATAA 1062 0.4878 MSSRTIISPETTEPQAPLLRSRHEGGGGRGPSLAQLLGRATGRRGPSVLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAVMLAFTVDERPNTPIRVWIVGYALQCFVHVVLVWIEYHRRTRRDSRRRQRDSDAEFSSDGNDSDDSDGDVNSSQSRFTKRCESINTGVSFLWWMVGFYWVVSGDDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRLSNPEEKASGGAGSMVPIETTSAYLATERILLPEDAECCICLCPYEDGVELHTLPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4971 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 348 IPR013083 -
Mal1g4971 353 SUPERFAMILY RING/U-box 289 347 - -
Mal1g4971 353 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g4971 353 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 353 - -
Mal1g4971 353 Pfam Ring finger domain 301 343 IPR001841 -
Mal1g4971 353 MobiDBLite consensus disorder prediction 1 37 - -
Mal1g4971 353 ProSiteProfiles Zinc finger RING-type profile. 302 343 IPR001841 -
Mal1g4971 353 PANTHER TARGET OF ERK KINASE MPK-1 11 353 - -
Mal1g4971 353 SMART ring_2 302 342 IPR001841 -
Mal1g4971 353 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4971 Mal-Chr1 120026779 120031589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4971 8 352 C3H Transcription Factor Family AT1G68070 67.723 1.52e-172 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4971 1 120026779 120031589 Mal1g4971 1 120026779 120031589 ECH