Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4963 ATGCCTGCGTCGTTGCTGAGAACGGCGCACTCCGGCGGGAAGAGTGCCGCTGTGGATGAGTTTCCGGCTGGGTTAAGAGTTCTCGTCGTTGATGATGACGTCACTACGTTGAAGATAATTGAGCGAATGTCTCTTCGCTGTCATTATCGCGTCACTACATGCTCTGAGGCTACTGTTGCTTTAAAAATTCTGCGGGAAAGAAAAGGCTGTTTTGATGTTGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGTTGGAAATGGACCTTCCTGTTATTATGATGTCTGTTGATGATAGGACAAGTACTGTGATGAAGGGAATTAGACACGGGGCTTGTGATTATTTTATTAAGCCTGTACGGTTGGAAGAACTAAGGAATATATGGCAGCATGTTGCTAGGAAAATTTTGAATGAAAATAAGGAACATGATTATTCTGGCAGCATAGAAGATAATGATCGCAATACACGGGGGAATGATGATAATGACAATATGTCATCTGTTGCTGGTGCAAAAAAAGCAATAGTTAAAGAACAAAAAAAGAGGAGCAATTTAAAAGATGGAGAAGATGTTGAATTGGAGAATGATGATCCATCTACATCTAAGAAACCTCGTGTAGTGTGGTCAATAGAGCTCCATCAACAATTTGTCAGTGCTGTGAATCAACTAGGACTTGACAAGGCTGTGCCAAAGAGAATACTCGAAATGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCGAGTCATTTGCAGAAATTTAGACTCTATTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAGTGGGATGCTAAACACAGTTCCTGGGACTATAGAATCCAAGCTAGCTGCTACTGGAATATATGACATACAGACTTTGGCTGCTTCTGGCCATGTATCCCCCGAAACACTTGCAGCCCTTCATGCCGAGCTCTTAGGTCACCCGATAACTAACATAATGCCTACAGTGGATCGGACTGCACTATTGCATGCATCTGTACAGGGGCCAAAACATTCCCGGGCTGATGATCATGCTGTAGCATATGGTCAGTCTCTTGTAAAATGTCCTTCCAACATTGTCAATAATTTCCCTCAGTCCATCTTAAAAGTAGATGATTCATCATCAGTATATGGAGCATGGCCACCATCTAGTACACTCGGGTCAGCCTCAAGTGGAAGGTTAGGCGTTCAGAATAATAACATGCTGATTGATAAATTGCAGCACCAACAAAGGCACCAGCACCAGCAAAAACAACAGCAGTCGCTAATACATGATCAGAATCGATTGATCAATGTTCAACCATCTTGCTTGGTGGTTCCTGCTCAATCTTCTGACACATTCCAGGCAGTAAGCAGTGTTGCTTCTGTCAACACTGATTGCAGTTTTGGCAGAAATGCCATTATTGATTATAGTCAATCATCACAAAAATCAAATAATTCATCGAGTTCTTCTCATTATCCTGGTGGAGACACCAAAGCTACCTCCATTTCTCCTCGAGTTTCCTCTTTTTCAGTAGGCTCCAGAAATAGCAATATTCAGCAGATTCAAAACTCAACCTCAACATTTGGTGCTTCTAGACCTTTGCCTAGCCTTCTTCCCATGACATTTAGACAAGTTCCATATGATACTAAATCCAGTGATTCACTTAATGAAGTATGTCTAAGGAATCTTGGATTTGTTGGCAAAGGTACCTGCATACCAAGTTTTGAAAATAAAATTCAATCATCTGCAAATGATTTTAGTCAAATGAAAGTATTCATGGCCAGCAATGGTAACACAGTGAAGGAGGAACCAAAAGAGGAACCAAGTTTTATCAGATATCCAAATGCAAGCCACCCAGTTGTACAGAATTATCCATCTCATGATCATTCAAGTGCATTCACTTAA 1914 0.4138 MPASLLRTAHSGGKSAAVDEFPAGLRVLVVDDDVTTLKIIERMSLRCHYRVTTCSEATVALKILRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSVDDRTSTVMKGIRHGACDYFIKPVRLEELRNIWQHVARKILNENKEHDYSGSIEDNDRNTRGNDDNDNMSSVAGAKKAIVKEQKKRSNLKDGEDVELENDDPSTSKKPRVVWSIELHQQFVSAVNQLGLDKAVPKRILEMMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQSGMLNTVPGTIESKLAATGIYDIQTLAASGHVSPETLAALHAELLGHPITNIMPTVDRTALLHASVQGPKHSRADDHAVAYGQSLVKCPSNIVNNFPQSILKVDDSSSVYGAWPPSSTLGSASSGRLGVQNNNMLIDKLQHQQRHQHQQKQQQSLIHDQNRLINVQPSCLVVPAQSSDTFQAVSSVASVNTDCSFGRNAIIDYSQSSQKSNNSSSSSHYPGGDTKATSISPRVSSFSVGSRNSNIQQIQNSTSTFGASRPLPSLLPMTFRQVPYDTKSSDSLNEVCLRNLGFVGKGTCIPSFENKIQSSANDFSQMKVFMASNGNTVKEEPKEEPSFIRYPNASHPVVQNYPSHDHSSAFT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4963 637 CDD REC_typeB_ARR-like 27 141 - -
Mal1g4963 637 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Mal1g4963 637 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 21 461 - -
Mal1g4963 637 MobiDBLite consensus disorder prediction 152 168 - -
Mal1g4963 637 MobiDBLite consensus disorder prediction 152 210 - -
Mal1g4963 637 Pfam Myb-like DNA-binding domain 213 261 IPR001005 -
Mal1g4963 637 MobiDBLite consensus disorder prediction 481 517 - -
Mal1g4963 637 Gene3D - 209 270 - -
Mal1g4963 637 Pfam Response regulator receiver domain 27 136 IPR001789 GO:0000160
Mal1g4963 637 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 461 IPR045279 GO:0009736
Mal1g4963 637 SUPERFAMILY CheY-like 24 148 IPR011006 -
Mal1g4963 637 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Mal1g4963 637 SMART REC_2 25 137 IPR001789 GO:0000160
Mal1g4963 637 MobiDBLite consensus disorder prediction 182 209 - -
Mal1g4963 637 PIRSF RR_ARR_type-B 7 633 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal1g4963 637 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Mal1g4963 637 Gene3D - 25 208 - -
Mal1g4963 637 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4963 Mal-Chr1 119874780 119881241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4963 17 282 Response Regulator Gene Family AT2G25180 55.056 4.29e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal1g4963 Response_reg 5.6e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4963 1 119874780 119881241 Mal1g4963 1 119874780 119881241 ECH