Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal1g4962 | ATGGCTGAAGCAACAGACTCTACACTCACCCAGATGAGAAAGTCTGCTGAAAAGCTTGGTTCTTCTACACAGGGTTATGGGGACCCTACACTAATGAGGTACTTGATTGCACGGTCAATGGAACCAGATAAAGCAGCAAAAATGTTTGTCCAATGGAAGAAATGGAGGGATACTATGGTGCCTAATGGGTTCATTCCAGATTCTGAAGTTCCTGATGAATTGGAAACTAGAAAGATCTTTTTGCAGGGTTTGTCTAAGGATAAATACCCTGTGATGATTGTCCAAGCAAGTAGACACTTCCCTTCCAAAGATCAGAATCAATTCAAGAAATTTATTGTACATTTACTGGACAAGACAATTGCAAGTGCTTTCAAGGGAAGGGAGGTAGGGAATGAAAAGTTGATTGGGGTTCTTGATCTGCAGAATATTTCATATAAGAATGTTGATGCACGTGGTTTAATTACTGGATTTCAATTTTTACAGTCTTACTACCCTGAACGTTTAGCAAAGTGCTATATTTTACATATGCCATGGTTTTTTGTGAGCGTTTGGAGACTAGTTTCCAGCTTCCTAGACAAGGCAACACAAGAAAAGATTGTAATTATAAACAATGAGGAAGAGAGAAAGGAGTTCATAAGTGATGTTGGTGAAGAGATTCTCCCAGAAGAGTATGGTGGAAGAGCAAAGCTTGTAGCTATCCAAGATGCTGAAGTGACACCACTGGAAAATGGAAGAACAAATTGA | 744 | 0.3938 | MAEATDSTLTQMRKSAEKLGSSTQGYGDPTLMRYLIARSMEPDKAAKMFVQWKKWRDTMVPNGFIPDSEVPDELETRKIFLQGLSKDKYPVMIVQASRHFPSKDQNQFKKFIVHLLDKTIASAFKGREVGNEKLIGVLDLQNISYKNVDARGLITGFQFLQSYYPERLAKCYILHMPWFFVSVWRLVSSFLDKATQEKIVIINNEEERKEFISDVGEEILPEEYGGRAKLVAIQDAEVTPLENGRTN* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal1g4962 | 247 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Mal1g4962 | 247 | PANTHER | OS03G0850700 PROTEIN | 1 | 239 | - | - | |
| Mal1g4962 | 247 | ProSiteProfiles | CRAL-TRIO lipid binding domain profile. | 67 | 232 | IPR001251 | - | |
| Mal1g4962 | 247 | PANTHER | SEC14 CYTOSOLIC FACTOR-LIKE | 1 | 239 | - | - | |
| Mal1g4962 | 247 | SUPERFAMILY | CRAL/TRIO N-terminal domain | 7 | 66 | IPR036273 | - | |
| Mal1g4962 | 247 | SUPERFAMILY | CRAL/TRIO domain | 67 | 229 | IPR036865 | - | |
| Mal1g4962 | 247 | SMART | sec14_4 | 73 | 229 | IPR001251 | - | |
| Mal1g4962 | 247 | Gene3D | - | 1 | 240 | IPR036865 | - | |
| Mal1g4962 | 247 | Pfam | CRAL/TRIO domain | 75 | 226 | IPR001251 | - | |
| Mal1g4962 | 247 | CDD | SEC14 | 80 | 226 | IPR001251 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal1g4962 | Mal-Chr1 | 119851342 | 119859664 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal1g4962 | 3 | 203 | Acyl Lipid Metabolism Gene Families | AT5G47730 | 23.256 | 1.69e-12 | 64.3 |
Event-related genes