Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4961 ATGTGTAAGACAATTCAAATACATGGATTCCCATCTAATGTATCTGCTGAAGAGGTAATGAAATTTTTGGAGCAACATGCTGGATTCCAAACTGTTCTTGCTGTAGATATTGATCATCATAAAGATGGAGATTCTATGACACATGTTAATGTTCAATTCACAGACAAAAAAAGTGTTGAAACAATCTTGAACATGGTTACTAAACATCTATCTTATGATGAAAATATTCTTAATGCTACATTAACTAAACCTGACATTTTGTCAAAGCCAAGGATCTTTGCTTACAACATGGATGGTATTGGAATACACTTTGGATGTCAAACATCCAAGGGAAAACTTAGTGTACTTTGGGAACATTCAAATGCTTCTGTTAAATTCGGAGTCAGATTAAGAAAAATGTATATATTTTTTCGCTATTTGTCTAAGGATTATAAGATGCAGATTAATTCCGAGAGCATATCGCGAATTGAGATGCATCACTCACAATGCCGTACCAAGAAACTTCTCCTTTTTCAGTTACGCAGTGCTCCTCGGATCTACGAAAAAGATGTTTCTGAAATCAAGTACTTTAAGGAAGCTTATGACAACCATTGGTTTAGAAGTGTAGATTTCACCCCATCATGCTGCATTGGACAATCATCATCTTTGTGTTTTGAGCTTCCACAAAATACCGAGGTTCCGAATTTTTGTCAACACTATCGAAATTATTATAAAGTTGATAACACCTTTGATCTTGAGAAACAACTTGGTTTCTCATCAAATTTGAATTTTGTCCCTATGGTGATTCCTCCAGAAGGATTCAATTTGCCATACAAAATTCTGTTCAAAATCAACTCACTAGTTCAACATAGTTGCCTTCCTTTGCTAGCAATAGACACTGATCTTTTTCATATGGTTGATCCAAAAAGAATAAAATTTGAATATATAGAAAGTGCTTTGAATAAGTTATATCAGATGAAAGAATGTTGTTATGATCCTGTTCAATGGTTGGAGAAACAATATCAAAGATACTCAACAAATAGTTCAATTCCTATATCCAGTTCCATTTCTTTAGATAATGGATTGGTATATGTTCATAGAGTACAAGTAACTCCATCTAAAATATATTTTTGTGGTCCTGAAGTGAATCTTTCGAATCGAGTTTTGCGCAACTATCCTGAAGACACCGATAACTTCCTTCGTGTTTCTTTTGTCGATGAGAACATGGATAAACTCCTTTCATCCGATTTGTTGTTGCGTTCCTCTTGTGTAAACGTGGATAGAGAAACAAAGGTCCATCAAAGGGTAATTTCTACGCTAAAAAATGGCATAGAAATTGGTGACAAGAAGTTCGAGTTTCTCGCTTTCTCGTCAAGTCAACTACGCGATAACTCGGCGTGGATGTTTGCATCGAGAAATGGACTAACCGCGTGCGATATAAGAAAATGGATGGGAGATTTTCATGAAATTAAGAATGTGGCAAAATATGCAGCTAGGCTTGGTCAATCATTCAGCTCTTCAAGGGAAACAGTGAGTGTTGCAAGAAATGAAATTGAAATGATTCCTGATATAGAATTGAAAAGAGGTGAAATCAAATATTGTTTCTCTGATGGAATAGGGAAAATATCTTATGACTTGGCTCAAGAAATTGCTAAAAAATGTGGATGCAAGGATCATATTATTCCATCTGCATTTCAAATCAGATATGGTGGATGCAAAGGTGTTGTTGCTATTGATCCTAATTCATCAACTAAACTTTCCTTGAGAAATAGCATGTGCAAGTTTAAGTCAGAAAACACAAAACTAGATGTACTGTCATGGAGCAAAAACAAACCGTGCTTTCTTAACCGTCAAGTAATCGTTTTGTTGTCCACACTCGGTGTCAAGGATCGAGTCTTTAAAAGGAAGCAAAGGGAGATTGTTAATAAACTCAAAATGATATCAAGAAAACCATTCAATGCACTAGACATGATGTCAGAAGGAACAATTACAAACATGTTAAGGGAAATGATAATTTGTGGATTCCATCCGACAAATGAACCTTTTCTTTCCATGATGTTGAGAACAATATGTGCAACAAAGTTACAAGAATTGCAGCTCAAAACTAGGATCTTTGTTAGGAAAGGAAGATCAATGTTAGGATGCTTGGATGAAACAAGGACATTAAAATATGGAGAGGTATTTGTGCAGATATCTCTTCCAAGAAAAAAAGTTATGTCCTCTATTTCTTCTAAGGGAATTGGAGCAAAACAAGGAAAATATATTGTTAAGGGGAAGGTAGTTGTAGCCAAGAATCCATGTCTTCATCCAGGAGATGTAAGGATATTGAGAGCAATTGATGTACCTTCCTTACATCATATGGTAGATTGTGTTGTTTTCCCACAGAAAGGGAGAAGACCACATCCTAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTCTGTTGGGACCCTGCTCTTATTCCTCCTCATCAGGAAAATCCAATGGATCATTCACCATCTAAAGTCATGCATGTTGATCATGATGTCACATTGCAGGATGTAGAGGAGCATTTCACTCACTACATTGTCAAAGACACCTTAGGAGTTATTGCAACTGCACACACAGTTTTTGCTGATAAGGAACCTGAAAAGGCAATGAGCCATTCATGTATAGAGCTTGCAAAATTACACTCAATCGCCGTCGATTTCGCAAAATCCGGCGTGCCGGCTGAAATACCACAACATCTCCATGTAAAACAGTATCCAGATTTCATGGAAAAGCAAGACAAACCAACTTATCAATCAAACAGCATAATCGGAAAGCTTTACCGCGAGGTGAAGAATGTTGCACAACAAAAAAACCTCAAAAAATCATTCACTAGAAAAGCTGCAAACAAGTTCTATGATCATGACATGAAAATTGATGGTTTTGAGAAGTACACAAAAGTTGCTTGTGAATACAAACAAATGTATGATTCTAAGTTAGGGAACTTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATTAGTGGAAATATTTTGAAGATGTCCAAATCTTTCAATGATAGAAAGGATAAAGAAGGAATAAATCATGCTGTATTGTCACTAAGGAATGAAGCTAGAAGTTGGTTTAGTGAGATGATAAGAAAATCAAATTCTCAAGGTGGTGGTGATGATGATTCTTATGCTATTGCTTCTGCTTGGTATTATGTAACATATCATCCTAGTTATTGGGGATGCTATAATGAGGGGATAAATAAGGATCATTTCCTAAGTTTTCCATGGTGTGTTCATGATACTCTTATTCAGATAAAGAAGGACAAAGCCAATAGTAGAACTTATGGATTGAAAGTTTGGAGAATGATGAAAATGTTTTTCATCACATTGATGTTTTGCATTTCATTGTGGATAATAATGCATTATCATATGAATTTGTATAATTGA 3420 0.3547 MCKTIQIHGFPSNVSAEEVMKFLEQHAGFQTVLAVDIDHHKDGDSMTHVNVQFTDKKSVETILNMVTKHLSYDENILNATLTKPDILSKPRIFAYNMDGIGIHFGCQTSKGKLSVLWEHSNASVKFGVRLRKMYIFFRYLSKDYKMQINSESISRIEMHHSQCRTKKLLLFQLRSAPRIYEKDVSEIKYFKEAYDNHWFRSVDFTPSCCIGQSSSLCFELPQNTEVPNFCQHYRNYYKVDNTFDLEKQLGFSSNLNFVPMVIPPEGFNLPYKILFKINSLVQHSCLPLLAIDTDLFHMVDPKRIKFEYIESALNKLYQMKECCYDPVQWLEKQYQRYSTNSSIPISSSISLDNGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDENMDKLLSSDLLLRSSCVNVDRETKVHQRVISTLKNGIEIGDKKFEFLAFSSSQLRDNSAWMFASRNGLTACDIRKWMGDFHEIKNVAKYAARLGQSFSSSRETVSVARNEIEMIPDIELKRGEIKYCFSDGIGKISYDLAQEIAKKCGCKDHIIPSAFQIRYGGCKGVVAIDPNSSTKLSLRNSMCKFKSENTKLDVLSWSKNKPCFLNRQVIVLLSTLGVKDRVFKRKQREIVNKLKMISRKPFNALDMMSEGTITNMLREMIICGFHPTNEPFLSMMLRTICATKLQELQLKTRIFVRKGRSMLGCLDETRTLKYGEVFVQISLPRKKVMSSISSKGIGAKQGKYIVKGKVVVAKNPCLHPGDVRILRAIDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPALIPPHQENPMDHSPSKVMHVDHDVTLQDVEEHFTHYIVKDTLGVIATAHTVFADKEPEKAMSHSCIELAKLHSIAVDFAKSGVPAEIPQHLHVKQYPDFMEKQDKPTYQSNSIIGKLYREVKNVAQQKNLKKSFTRKAANKFYDHDMKIDGFEKYTKVACEYKQMYDSKLGNLMDYYGIETEAEIISGNILKMSKSFNDRKDKEGINHAVLSLRNEARSWFSEMIRKSNSQGGGDDDSYAIASAWYYVTYHPSYWGCYNEGINKDHFLSFPWCVHDTLIQIKKDKANSRTYGLKVWRMMKMFFITLMFCISLWIIMHYHMNLYN* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4961 1139 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1125 - -
Mal1g4961 1139 CDD RRM_SF 5 65 - -
Mal1g4961 1139 Pfam RNA dependent RNA polymerase 363 936 IPR007855 GO:0003968
Mal1g4961 1139 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1125 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4961 Mal-Chr1 119845538 119849552 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4961 1 119845538 119849552 Mal1g4961 1 119845538 119849552 ECH