Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4949 ATGGAGTGTAAAGAAATTGGAGAGGGAAGTGATGTTGGAAAAGAAAATGAAAATCAAGAGGTTCTAAAGAAGATTATTGCAAACCATCCTTTATTTGAAGTATTGATTGAGTCTCACATCAATTGTTTGAAGGTCGGATCTGAGGATCCAGGAAAGTTTGATATAACAAGTGATGCATGGAAGAAATTGGTCAACACAAAGTCCAAAACAACGACTACTCCAAACAATTCAGAGCTTGATCACTTCATGGAAGCATTTTGCATGGCATTGAGCAAGCTGAAAGAAGTGATAGATGAACCAACAAAAGAAGCAAAAGCTTTCATTGATGAGACGTATATTCAACTGCAGGAACTTGGTGAAGCAAATAACCCGCACCTTAATTATGATAATACTAATTAA 399 0.3609 MECKEIGEGSDVGKENENQEVLKKIIANHPLFEVLIESHINCLKVGSEDPGKFDITSDAWKKLVNTKSKTTTTPNNSELDHFMEAFCMALSKLKEVIDEPTKEAKAFIDETYIQLQELGEANNPHLNYDNTN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4949 132 PANTHER FUSED COMPOUND LEAF 1 10 116 - -
Mal1g4949 132 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 116 - -
Mal1g4949 132 Pfam KNOX1 domain 22 46 IPR005540 GO:0003677|GO:0005634
Mal1g4949 132 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
Mal1g4949 132 Pfam KNOX2 domain 75 118 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4949 Mal-Chr1 119667885 119669597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4949 20 130 Homeobox Transcription Factor Family AT4G08150 31.667 1.52e-10 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4949 1 119667885 119669597 Mal1g4949 1 119667885 119669597 ECH