Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4947 ATGATAATAATCAAACCGAGAAATTCCAAACGGAAGCTTCCTCACGAAGCATCACCGTTGCATTTTCACGCCGTTAGCAAAAAACTCCGATCAAAGATTCCTCGCCGGAGAAGACACCAGATCTCGCCGGTGCTACTTGTTTCGCCGAGATTCAAAGCTTCACGCGAGAATTACGGTTTCTCAGTTGCTTCAGTTGATTCGAGTTCGTGTTCCGGTTCGGATTTCGCCGGCGGTGAAGTTTCGTGTGATTCGAGTAGGATTTCTACTGTTTTCGCCGGTAAAGGAAGGACGATAACGAGTTCGAGAAATGAAATTTCGAGTGGATTTGAGAAGCGGAATGAAAATGAAGTTGAAGTTTCGGAGACTTCGTGTGTGGATTCAAATTCTGGAGTTCGAAGCTTGATTTTGAAGTTCAAAAATGGAAAGGAGAACGATGAAGTTTCAGAAGTTTGCACGAAATCGGAAGTTACTTGTGCTGAGAATTCAAAATCCAGTAACGGAAATTTGAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTCGTTTCCGTTAACAGAGCATCGGAATCTGAATTCTCGCAAATTTCTAGAAACCGTAACGCTGATGAGAATTGCGCGATTGTGCAATCGATTATGAAGAATTATTCTGATAATTCAGGTTACGATTCCGATCTAGCTTGTTCTGAGAAACTGCAATTCTCCTATTACGACGATGATGATGAATCGGAGGAGTATTGTTCAAGTCAGGGAACTACATTCTCTGATCTTCACTCCGAGAATTTCGGTGATTGTTCAGATTATTCTCCGTCTCAGTTCATTGATTCCGGTAGCGAATTTTCTCAAGGATCGGTTGGTGAAACTCCTTCGCATACTTATTCGATGCTTCTTCGATACCGCGACGAATTCGTGATTCTAGATTCTCCAGTTAAAACTACTTCAAGCGTTGAAGAAGATTTTTCTCCTCATAACAATTTTTCAAGGTTTGAAGATATGGATGACGAAGAGAGTTACCAGATGCTTAGAAAGAGAGAACGGAGGCAAGTTTTCATGTGGAATTATGGTGAAAGATATTTCTCTGCAGCGGATTTTGCGGAACTGTTCCAGCAACGTTCACAAATGGTTCATTGGATCGTTGAGCATTCGTATCGAAAACAGCTTCGACAAGAGACAATGTTTCTTGCAATCAACCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGCAGAAAGAAACCTTCAAATTGTTGGAATAGCGTGTCTTACATTGGCAACCAGAATAGAAGAAAACCAGCAGTATAACAGAGTGAACCAGAAAAATTTCTACATAGAAAAAACTGCGTACAGTAGATGCGAAGTGGTGGCTATGGAATGGATGGTACAGGAGGTGCTTGAGTTCGAATGTTTTCATCCAACCATCTACAATTTCTTGTGTTACTACCTTAAAGCTGCTAATGCTGATGCTGTTGTGGAGAAAAGGGTCACGTGCCTTGCATTATTGGCTCTGTCAGGTCCTGATCAGCTGTGTTACTGGCCCTCAACTATTGCTGCTGCACTTGTTATCCTGGCTTCTCTAGAGCTCAATCAGAAAGCATCCCACAAAGTCATAGGGATCCACATTAGATCAAAGGAAGAGAATTTGCATGAATGCATGGAGAGCATGGAGTGGTTGTTACGCTATCTATGA 1689 0.4192 MIIIKPRNSKRKLPHEASPLHFHAVSKKLRSKIPRRRRHQISPVLLVSPRFKASRENYGFSVASVDSSSCSGSDFAGGEVSCDSSRISTVFAGKGRTITSSRNEISSGFEKRNENEVEVSETSCVDSNSGVRSLILKFKNGKENDEVSEVCTKSEVTCAENSKSSNGNLNLNISSEITRNDVVSVNRASESEFSQISRNRNADENCAIVQSIMKNYSDNSGYDSDLACSEKLQFSYYDDDDESEEYCSSQGTTFSDLHSENFGDCSDYSPSQFIDSGSEFSQGSVGETPSHTYSMLLRYRDEFVILDSPVKTTSSVEEDFSPHNNFSRFEDMDDEESYQMLRKRERRQVFMWNYGERYFSAADFAELFQQRSQMVHWIVEHSYRKQLRQETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEENQQYNRVNQKNFYIEKTAYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCYYLKAANADAVVEKRVTCLALLALSGPDQLCYWPSTIAAALVILASLELNQKASHKVIGIHIRSKEENLHECMESMEWLLRYL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4947 562 Gene3D - 368 464 - -
Mal1g4947 562 Pfam Cyclin, C-terminal domain 472 557 IPR004367 -
Mal1g4947 562 SMART cyclin_7 376 463 IPR013763 -
Mal1g4947 562 ProSitePatterns Cyclins signature. 371 402 IPR006671 -
Mal1g4947 562 CDD CYCLIN 371 430 IPR013763 -
Mal1g4947 562 Gene3D - 465 562 - -
Mal1g4947 562 Pfam Cyclin, N-terminal domain 365 468 IPR006671 -
Mal1g4947 562 PANTHER CYCLIN-SDS 9 553 - -
Mal1g4947 562 SUPERFAMILY Cyclin-like 472 559 IPR036915 -
Mal1g4947 562 SUPERFAMILY Cyclin-like 331 468 IPR036915 -
Mal1g4947 562 PANTHER CYCLINS 9 553 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4947 Mal-Chr1 119619744 119624010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4947 362 530 Core Cell Cycle Gene Families AT5G11300 34.254 8.59e-19 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4947 1 119619744 119624010 Mal1g4947 1 119619744 119624010 ECH