Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4946 ATGTCGACATCAGTGGACCATACTGATCAAAGAGCAGAAGCGATTCCCTGCTCCACAGCTACACCAGATTGGACTGTTCATGTTTCAGATATAAGAACAGTTAAGGTGAGTAACATATCACTGATTACTTCCAAGCAGGACATTGAAGAATTTTTTTCATTCTCAGGTGATATTCAATATATTGAAATGCAAAGGGAATCTGATCGCACTCAGGTTGCTTATGTTACCTTTAAGGATTCACAGGGAGCAGAGACAGCAGTTCTCTTGACAGGTTCTAAGATAGCTGACCTATATGTCACCATCTCACCTGTGGAGAAGTACCAGCTTCCCCCTGAAGCTCTTCCCTCAAGTCCAACAAACCAAAGTGCTGCTGCAGTTAAGAAGGCTGAAGATGTAATAAGTACCATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCAATCAACAAGACAAAATCCATTGATGAACGTCTTCAGTTGACCTCCAATGCATCTTCCGCAGTTGCTTCTATTGATCATAAAATTGGTTTAAGTGATAAACTAAGTATTGGAACAACCATTGTCAATGAAAAGGTGAAAGAGATGGATGAAAGGTATCAGCTTTCTGGAATGACAAAGTCTGCTTTTGCTGTTGCTGAGCAAAAGGCAAGTAATGCTGGATCCGCTATCATGAGCAATTCTTACGTCTTAACCGGAGCTTCATGGCTGTCGAGTGCGTTTAGCGCTGTTGCAAAGGCAGCTGAGGATGTCAGCACGATGACCAAGGAGAAGGTTGAACAAGCTGAGGTGGAAAAAAAGGAGATCATTTACAGTGAAAGAAAAGGGACGGTCGATGAATATGCTCAGATGCACTTTGAGGACTCTTCAAATGGCGGCCCTGCAGTAGTTCCTGTTAATTCCGAAAATGACGGTAAAGCTGGTAATTTTCTAATTTGA 936 0.422 MSTSVDHTDQRAEAIPCSTATPDWTVHVSDIRTVKVSNISLITSKQDIEEFFSFSGDIQYIEMQRESDRTQVAYVTFKDSQGAETAVLLTGSKIADLYVTISPVEKYQLPPEALPSSPTNQSAAAVKKAEDVISTMLAKGFILGKDAINKTKSIDERLQLTSNASSAVASIDHKIGLSDKLSIGTTIVNEKVKEMDERYQLSGMTKSAFAVAEQKASNAGSAIMSNSYVLTGASWLSSAFSAVAKAAEDVSTMTKEKVEQAEVEKKEIIYSERKGTVDEYAQMHFEDSSNGGPAVVPVNSENDGKAGNFLI* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4946 311 Gene3D - 28 102 IPR012677 -
Mal1g4946 311 SUPERFAMILY RNA-binding domain, RBD 25 107 IPR035979 GO:0003676
Mal1g4946 311 MobiDBLite consensus disorder prediction 288 311 - -
Mal1g4946 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Mal1g4946 311 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 8 306 - -
Mal1g4946 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 8 306 - -
Mal1g4946 311 SMART rrm1_1 33 102 IPR000504 GO:0003723
Mal1g4946 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 95 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4946 Mal-Chr1 119614099 119618874 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4946 1 119614099 119618874 Mal1g4946 1 119614099 119618874 ECH