Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4943 ATGCTTCTCTCAATCTTCTTCCTTTTGTTTTTCCTCACAAATCTTCAACCTTCAATCTCCCAACAACAACAACATAAACTAACATCATTCAACATCTCAAACTCACCATGGCTTCCTTCACAAAACAAAACACTTACCTCACCAAACACAAATTTCACAGCTGGTTTTTTTCCTATACCAAATTCACCAAACCTCTTCACTTTCTCAATTTGGTTCACAAAAATACCTCAAACTTCAAATCCTCTAATTTGGAGCTTACCAACAAAGCTCAACTCATCTTCCTCTCTTGTAATCACTTCAAAAGGTGAACTTTTACTCAACAATGTTTCCTTTGTTAATCATTCCAATTCAACTCAACTTGTTCTTCGTGATAGTGGAGAATTAGTTTTTGGAAATTGGACTAGTTTTTTAAATCCATTTAACACTATTGTACCAACCCAAAACATTAGTGGAATTGAAATTGTTTCAAATAATGAGAAGTTCAAGTTTATAAATTCTCAGTTTTTGATTCTCAATGATAATTCATCTTCTCAATACTATAACACACCAAACCCTTTGGTGAGTATGGATGATCTTGGAAAAATGAGTATGGTAGGTAACTCTTTTCTCACTTCTGATTATGGTGATTCTAGGATTAGAAAACTTGTTCTTGATGATGATGGAAATTTAAGAATCTATAGTTTTTATCCTGAGCAAAAGAATACATGGGTTGTTGTTTGGTTAGGAATTTGGGAAATGTGTAAAATCAAAGGAAAATGTGGTCCTAATTCAATTTGTATGCCTAGAGAAGATTTCTATAATTCAACTTATTGTGTTTGTCCTTCTGGATTTGAGCCTGTTGAAGGTGGAAGTGAAAAGGGTTGTAAGAGGAAAATTGCACTTTCTAATAATACTCATTTTCTTAGGCTTGATTATGTAAACTATACAAGTAATGGTTCAATGAACCAAACTATTGCTTCAAACTATACAATTTGTGAAGCAAGATGTAAAAGATATTTGGACTGTCTTGGATTTGGATTCAAATATGATGGATCGGGATATTGTGTTTTGTTACGAGGTAAACAGCTTCAATATGGTTATTGGTCACCAGGGACTGAACTTGCTTTGTTTTTGAAAGTTGATCAAAAGGAAACAGAAGCTCCTAATTTCATTGGTATGACAGAAGTGATGCAAACAACTTGTCCTGTGAGGATAAGTTTGCCGTTTCCGCCTAAGGATTCGAACACTACCACTAGAAATATTGTGATTATTTGCACGCTTTTTGCGGCTGAACTCATTGCTGGTGTGGCTTTCTTTTGGTCTTTCCTTAAGAGGTATATCAAGTATAGGGACATGGCAACCACATTAGGTCTTGAGCTTTTACCTGCAGGTGGTCCGAAACGGTTTACCTACTCTGAGATCAAAGCTGCTACTAATGATTTCTCGAATCTCATTGGTAAAGGTGGATTTGGAGATGTTTATAAAGGTGAGTTGCCTGATCACCGTGTTGTTGCGGTGAAGTGCTTGAAGAATGTTACCGGTGGTGACGCTGAGTTCTGGGCGGAAGTTACAATCATTGCGAGGATGCATCATCTTAACTTGGTTCGATTGTGGGGTTTCTGCGCCGAGAAAGGTCAAAGAATACTTGTTTATGAATACATTCCGGGTGGATCATTGGACAAGTACCTCTTCAGGGTCAAATCTAAAAAGAGTAGTGGTGAATCGGAATCTGATCTAAGTCATGATACTAGTCCACCTGATCCAAGTATCTCAGAGAAACCAGTTTTGGATTGGAACATGAGGTATAGAATTGCTCTTGGTATGGCAAGGGCTATTGCATATCTACATGAGGAGTGTTTAGAATGGGTTTTGCATTGTGATATTAAGCCCGAAAACATTCTCTTAGGCGATGATTGTTGTCCTAAGATATCGGATTTTGGATTGGCGAAACTAAGGAAAAAAGAAGATATGGTGACTATGTCAAGAAGGAGAGGAACTCCTGGTTATATGGCACCTGAATGGATAACAGCAGATCCAATAACTTCAAAAGCTGATGTTTATAGTTTTGGTATGGTGCTGTTAGAGCTTGTGAGTGGAGTGAGGAACTTCGAGATTCAAGGCTCGGTGGCGAGGAGTGATGAATGGTATTTTCCTGGCTGGGCTTTTGATAAGATGTTTAAGGAAATGAGAGTTGAAGAGATTCTTGATAGTCAAATTTGTCATGCTTATGATAGTAAAGCACATTTTCAATTGGTTAACAGAATGGTGAAGACTGCAATGTGGTGCTTGCAGGATAGGCCTGAGGCAAGGCCAACAATGGGGAAGGTGGCTAAGATGATAGAAGGGACTGTGGAGATCATGGATCCTAAGAAGCCAACTGTTTTCTTCCTTGGGGAAGAGTAG 2382 0.3795 MLLSIFFLLFFLTNLQPSISQQQQHKLTSFNISNSPWLPSQNKTLTSPNTNFTAGFFPIPNSPNLFTFSIWFTKIPQTSNPLIWSLPTKLNSSSSLVITSKGELLLNNVSFVNHSNSTQLVLRDSGELVFGNWTSFLNPFNTIVPTQNISGIEIVSNNEKFKFINSQFLILNDNSSSQYYNTPNPLVSMDDLGKMSMVGNSFLTSDYGDSRIRKLVLDDDGNLRIYSFYPEQKNTWVVVWLGIWEMCKIKGKCGPNSICMPREDFYNSTYCVCPSGFEPVEGGSEKGCKRKIALSNNTHFLRLDYVNYTSNGSMNQTIASNYTICEARCKRYLDCLGFGFKYDGSGYCVLLRGKQLQYGYWSPGTELALFLKVDQKETEAPNFIGMTEVMQTTCPVRISLPFPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRVKSKKSSGESESDLSHDTSPPDPSISEKPVLDWNMRYRIALGMARAIAYLHEECLEWVLHCDIKPENILLGDDCCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEIQGSVARSDEWYFPGWAFDKMFKEMRVEEILDSQICHAYDSKAHFQLVNRMVKTAMWCLQDRPEARPTMGKVAKMIEGTVEIMDPKKPTVFFLGEE* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4943 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Mal1g4943 793 ProSiteProfiles Protein kinase domain profile. 472 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4943 793 Gene3D Transferase(Phosphotransferase) domain 1 549 784 - -
Mal1g4943 793 Pfam S-locus glycoprotein domain 207 280 IPR000858 GO:0048544
Mal1g4943 793 PIRSF SRK 1 793 IPR024171 GO:0004674
Mal1g4943 793 Pfam Protein kinase domain 476 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4943 793 Gene3D Phosphorylase Kinase; domain 1 446 546 - -
Mal1g4943 793 SMART serkin_6 472 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4943 793 SUPERFAMILY Protein kinase-like (PK-like) 455 773 IPR011009 -
Mal1g4943 793 PANTHER OS10G0101000 PROTEIN 5 793 - -
Mal1g4943 793 PANTHER OS07G0415500 PROTEIN 5 793 - -
Mal1g4943 793 MobiDBLite consensus disorder prediction 565 585 - -
Mal1g4943 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 227 IPR036426 -
Mal1g4943 793 ProSiteProfiles PAN/Apple domain profile. 288 374 IPR003609 -
Mal1g4943 793 ProSitePatterns Protein kinases ATP-binding region signature. 478 500 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4943 Mal-Chr1 119567121 119569502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4943 460 785 Receptor kinase-like Gene Family AT4G18250 39.339 9.51e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal1g4943 Pkinase 1.6e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4943 1 119567121 119569502 Mal1g4943 1 119567121 119569502 ECH