Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4905 ATGAGGTTGTTCTTTTTCATGTTCATGTTCTTGTTCTGTTCTTTTCTTTTTGTTGTACCTTGTTACTCTGTTTCACCTAGAAATTTTCCTATTATACCCTTTGATGAAGGGTATACACCTTTGTTTGGAGACCATAACTTGATCATTTATTCTGATTCCAAAACTGTTCATCTCTCACTTGATGAGTCTTCAGGCTCTGGATTTGCTTCTCATGATCTTTACCTTCATGGGTATTTTAGTGCTTCCATTAAATTACCTCCTGATTACACTGCTGGAGTTGTGGTTGCATTTTATTTGTCAAATGGTGACATGTATGAGAAGAACCATGATGAAATAGACTTTGAATTTTTGGGAAACATAAGAGGCAAAGATTGGAGGGTTCAAACCAATATATATGGAAATGGAAGTACAAGCATTGGAAGAGAAGAAAGATATGGTTTATGGTTTGATCCTTCTGAGGAATTTCATCAGTATAGTATTCTCTGGACAGATTCTAAGATCATATTTTATGTAGATGATGTTCCTATCAGAGAAATAAAGAGAACAGAGTCAATGAGAGGAGATTTTCCATCAAAGGCAATGACATTGTATTCTACCATATGGGATGCATCTACTTGGGCTACCAATGGAGGAAAATACAAAGTAAACTACAAATATGCACCCTATGTTGCTGAATTCTCTGACTTTGTCCTACATGGTTGTGCAGTTGATCCTATTGAGCATGTGACCAACTGTGACAGTGCTCAAAGTTCTGAAACAGTTCCTTCTGGTGTAACACAAGTAGAAAAAATCAAAATGGAGAACTTTAGGTTGAAGCACATGACATATTCTTACTGTTATGACAAAACAAGATACAAAGTCCCTCTACCGGAGTGTGTGATCGATTCTCGACAAGCTGAAAGGCTGAGAAAATTTGATCCTGTTACATTTGGTAATGGCAGGCACCGCCGTGGAAAGCGACACCACCACAATAAAGATAACCGGGCAGAAGAAGCTTCATTTTAG 1005 0.3751 MRLFFFMFMFLFCSFLFVVPCYSVSPRNFPIIPFDEGYTPLFGDHNLIIYSDSKTVHLSLDESSGSGFASHDLYLHGYFSASIKLPPDYTAGVVVAFYLSNGDMYEKNHDEIDFEFLGNIRGKDWRVQTNIYGNGSTSIGREERYGLWFDPSEEFHQYSILWTDSKIIFYVDDVPIREIKRTESMRGDFPSKAMTLYSTIWDASTWATNGGKYKVNYKYAPYVAEFSDFVLHGCAVDPIEHVTNCDSAQSSETVPSGVTQVEKIKMENFRLKHMTYSYCYDKTRYKVPLPECVIDSRQAERLRKFDPVTFGNGRHRRGKRHHHNKDNRAEEASF* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4905 334 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 9 313 - -
Mal1g4905 334 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 256 292 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mal1g4905 334 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 295 IPR013320 -
Mal1g4905 334 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 25 226 IPR000757 GO:0004553|GO:0005975
Mal1g4905 334 PIRSF EndGlu_transf 1 297 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mal1g4905 334 Gene3D - 22 292 - -
Mal1g4905 334 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 9 313 IPR044791 GO:0004553
Mal1g4905 334 CDD GH16_XET 32 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mal1g4905 334 Pfam Glycosyl hydrolases family 16 38 218 IPR000757 GO:0004553|GO:0005975
Mal1g4905 334 MobiDBLite consensus disorder prediction 305 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4905 Mal-Chr1 118364150 118366974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4905 5 330 Glycoside Hydrolase AT1G14720 64.742 1.06e-159 448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4905 1 118364150 118366974 Mal1g4905 1 118364150 118366974 ECH