Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0234 ATGGCTTTGGACGAACCGTCGATACCTTCTAACCCTAATTCAGACGACGGAACCGATAACAGAACACCACCGTCCTCTGCCGTGAATGACGGCGAAGATGTGAAACCAGCGACAAGGCTACAACGTTGGACGAGGCAGGAAATTCAGGTGCTAGTACAAGGAAAGAGTGATGCTGAAAACCGGTTCAAACCGGGTCGAAACGGTGCGTTGTTTGGTTCGAGTGAACCGAAGTGGACGTTGGTTTCTTCGTACTGTGAGAAACATGGTGTGAACCGGACACCGATGCAGTGTAAGAAGCGGTGGGGCAACCTCATCGCAGATTATAAGAAGATTAAGGAGTGGGAGTCTCACGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAACGTTGAGTTGAGGAGAGAAAGGAAATTGCCTGGTTGTTTTGATAGGGAGGTTTATGATATTCTTGATCCGACGGTGGTTGCGGCAGCGGCTGAAACGGTTTCAGAGGCGGTTGGTGATGATGAGGAGGAGGCTTATGATAGTAATAGGAAAGTGAGTGGTGAAGATGGGTTGTTTTCTGCTTTAGACAGGGATGAGGTTTTGGTTCCTTCTAAGGATGATCATGTTCTTTCACTTGTTCCTATCTCAGAGAAGCAATCTCTTCCACTCCACCAAGGGGAACGTAAGAGGAAGCGAATTGCAACTGATCATAGCAATGAAGAGAATGAAGAGGAGGAAAGTTTGCAAAGTCAATTAATTGAGGTGTTAGAGAAAAATGGCAAGATGCTAAGTGAAAAACTAGAGGCTCAGAACATTAACTTTCAGTTGGATCGCCAGAACAAGAATGAGAATGCAAGTAACATGGTTGCTGTGCTTGATAAGCTTGCAAATGCTATTGGGAGAATTGCTGATAAATTGTAG 906 0.4547 MALDEPSIPSNPNSDDGTDNRTPPSSAVNDGEDVKPATRLQRWTRQEIQVLVQGKSDAENRFKPGRNGALFGSSEPKWTLVSSYCEKHGVNRTPMQCKKRWGNLIADYKKIKEWESHVRDETESFWLMNVELRRERKLPGCFDREVYDILDPTVVAAAAETVSEAVGDDEEEAYDSNRKVSGEDGLFSALDRDEVLVPSKDDHVLSLVPISEKQSLPLHQGERKRKRIATDHSNEENEEEESLQSQLIEVLEKNGKMLSEKLEAQNINFQLDRQNKNENASNMVAVLDKLANAIGRIADKL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0234 301 MobiDBLite consensus disorder prediction 1 40 - -
Mal1g0234 301 Coils Coil 248 279 - -
Mal1g0234 301 MobiDBLite consensus disorder prediction 217 234 - -
Mal1g0234 301 MobiDBLite consensus disorder prediction 7 27 - -
Mal1g0234 301 SUPERFAMILY Homeodomain-like 41 110 IPR009057 -
Mal1g0234 301 MobiDBLite consensus disorder prediction 216 242 - -
Mal1g0234 301 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 221 - -
Mal1g0234 301 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 220 301 - -
Mal1g0234 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 221 - -
Mal1g0234 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 220 301 - -
Mal1g0234 301 Pfam Myb/SANT-like DNA-binding domain 41 126 IPR044822 -
Mal1g0234 301 Gene3D - 43 110 - -
Mal1g0234 301 ProSiteProfiles Myb-like domain profile. 35 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0234 Mal-Chr1 2607916 2608821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0234 14 113 Trihelix Transcription Factor Family AT1G76880 27.723 2.42e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g0234 Myb_DNA-bind_4 9.3e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0234 1 2607916 2608821 Mal1g0234 1 2607916 2608821 ECH