Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2957 ATGTCTGCTGAAATGCAAAACGATTCCACTCAAGCTTCATCGTCGTCTTCACGACCATCTGCGGCTCCTTTGAGCCGCTATGAATCACAAAAACGGCGAGACTGGAACACCTTTGGCCAGTACTTGAAGAACCTGACACCGCCAATTTCAGTGTCTCAGTGCAACTTCAACCACGTGCTGGACTTCCTTCGGTACCTCGACCAGTTCGGGAAGACCAAGGTCCACTTGCACGGCTGCATCTTCTTCGGCCAACCTGACCCGCCGGCGCCCTGCACCTGCCCTCTCAGGCAGGCTTGGGGGAGCCTTGACGCGCTCATCGGAAGGCTTAGAGCCGCCTATGAAGAGCACGGCGGCTCACCGGAGACTAATCCCTTTGGAAGCGGAGCTATTCGTGTGTACTTGCGTGAAGTCAAGGAGGGTCAGGCAAAGGCTAGAGGGATCCCATACACAAAGAAAAAGAAGAAGAAGAGGAGCCTAATAACGGGGAGTCATGATCAAGTTCAACCCTCAAAGTCCTTCAAGCAATTGGCTTCTTGA 537 0.5345 MSAEMQNDSTQASSSSSRPSAAPLSRYESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARGIPYTKKKKKKRSLITGSHDQVQPSKSFKQLAS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2957 178 MobiDBLite consensus disorder prediction 1 24 - -
Lja6g2957 178 Pfam ALOG domain 15 139 IPR006936 -
Lja6g2957 178 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 9 166 - -
Lja6g2957 178 MobiDBLite consensus disorder prediction 162 178 - -
Lja6g2957 178 ProSiteProfiles ALOG domain profile. 26 153 IPR006936 -
Lja6g2957 178 PANTHER PROTEIN G1-LIKE2 9 166 IPR040222 -
Lja6g2957 178 MobiDBLite consensus disorder prediction 144 178 - -
Lja6g2957 178 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2957 Lja-Chr6 58508063 58513036 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2957 6 58508063 58513036 Lja6g2957 6 58508063 58513036 ECH
Lja6g2957 6 58508063 58513036 Lja4g0926 4 7868825 7874181 ECH
Lja3g3760 3 74232998 74235522 Lja6g2957 6 58508063 58513036 ECH
Lja3g4878 3 90853336 90855823 Lja6g2957 6 58508063 58513036 ECH
Lja3g2979 3 54781015 54781578 Lja6g2957 6 58508063 58513036 ECH