Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1160 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAGCCCTTCAAAGGGGGGCATCTTGGGCTGCAGCTGATGCCTGGAATGGCGGATCGTGACACGAAGCCGTTTTTTCCTGGGCGCGATCCAGCTATGTTAGTAGGTGCAAATGGAGCTTTTCACCCTCGGGATTGTGTTGTTTCCGAGCCGCCTATGCCGATGAACTATGTTAGAGATAATTGGATAAACCAGAGGGATAGGATATTTAATATGCAGCCCCCGAATCCTAATTATGCTGTTCTTCCAGAGACATCAGGAGCTCCGTCCTTGCCAGTTATACAGCCACATGACATATCAAGAGATGAGAAACCGGATCGAATTGAAGAATTGGTTGTTAAAAAGGAAGGTGGCCAGTCGAAGAAAAGGCAAAGCAAGGGTGCTCTGACAACCCCGAAAGCTAAGAAGCCTCGTAAACCAAAGGACAATAGCAATGTTGCAGTTCAGCGTGTCAAACCACCAAAGAAGCCTATGGAGCTCGTCATCAATGGGATTGATATGGACATTTCTGGTCTACCTGTTCCAGTTTGTTCATGTACCGGGTCTCCTCAACAGTGTTATCGTTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTTTCTATATATCCTTTGCCGATGAGCATAAAAAGGCGTGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTGGAGAAACTTGCAGCTGAAGGTTACAATTTTGCTAACCCAATTGATCTAAGAACTCACTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 837 0.4612 MDDDVLNMPNWGYYEPFKGGHLGLQLMPGMADRDTKPFFPGRDPAMLVGANGAFHPRDCVVSEPPMPMNYVRDNWINQRDRIFNMQPPNPNYAVLPETSGAPSLPVIQPHDISRDEKPDRIEELVVKKEGGQSKKRQSKGALTTPKAKKPRKPKDNSNVAVQRVKPPKKPMELVINGIDMDISGLPVPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1160 278 PANTHER - 1 278 IPR010409 -
Lja4g1160 278 MobiDBLite consensus disorder prediction 87 164 - -
Lja4g1160 278 MobiDBLite consensus disorder prediction 110 135 - -
Lja4g1160 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Lja4g1160 278 SMART GAGA_bind_2 1 278 IPR010409 -
Lja4g1160 278 PANTHER BNAA06G09500D PROTEIN 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1160 Lja-Chr4 10301697 10303707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1160 1 278 BBR or BPC Transcription factor family AT2G01930 59.468 1.21e-106 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lja4g1160 GAGA_bind 2.7e-105 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1160 4 10301697 10303707 Lja4g1160 4 10301697 10303707 ECH