Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1159 ATGAGGGTATGGAAAAAGGCCACAGGAGCTCTCAAAGACAAGAACAGCATTTGGGTTGCGAAATTCTCTCGAAAGGGACCATTTCGAAACCCTGATCTTGAAACGGTGATCATCAAGGCTACGAGCCATGATGAACACAGCATTGATTGCAAGAATGTGCAGAGAGCCTTCAAATGGCTACACACCTCGCCTCTGTATTTGAAACCTCTGGTTTGGGCTCTGTCGATTCGAATGCAAAAGACTAAGAGTTGGGTTGTTGCTCTCAAAGGCTTGATGCTCATTCATGGCGTTTTCTGCTGTGATCTCCCTGTGGTGCAGAGAATGGGGAGGTTACCTTTTGATTTCTCAAATTTCTCTGATGCCCATTTGGCTCCTGCAAAAGCTTGGGGATTCAACGCTTTCGTTCGCGCCTATTTCGCGTATTTGGATCAGAGATCAGCTTTTGTTTCCTCTGAGGTTAAGAAGCAGAAGAACAAGGAGGGTGAAGTTGAGGGGACATTGATGGAGGAGCTTGAGAAGTTGCAGAAATTGCAGGCCATGATTGACATGCTTCTGCAGATCAAGCCGAGGAACACGGACATGAACGTTGGTCTTGTTCTTGAGGCCATGGATTGTGTCATTGTTGAGGTTTTTGACGTGTATAGCAAGTTTTGTAAGAAGATTGCAACGGTGTTGTTGAGGATTTATGATGTAGGTGGGAAATTGGAAGCGAGTATGGGACTCAAGGTTCTGCAGAAAGCATCTGTTCAGAGAGATGAACTTTCTGAGTACTTTGAGTTTTGCAGGGTAATTGGTGTTCTTAATGCCTCTCAATGCCCCAAGATTGAGAGAATCCCTGAAGAAGATATTAGAGATCTTGAGAGGATAATCAGTGGTGCCTCTGCAAAGAAAAGTAATAATGGTGTTGTTGATGGGAATGAGGAGGAGAAGGCCATTGTGGTGAGAGATTTCTCTGCCTCTTCAATCATTGAATCAGAGAAAGGTTTGATTACTGTGATCACACACCAATGGGAGGTGTTTGATGATGATATTTTGGTTGATGTTAGAGGGAATAATAAGGTTTGCAATGGTGTTATTGGCACAACAACAACCAACCCTTTTGAGGAATCATATAGCCTTGTACCTTATGTTCCTCATGTTGCTCACAATCAAGTTCTTCCTGATTTAATTAGTTTGTAG 1179 0.4334 MRVWKKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQRMGRLPFDFSNFSDAHLAPAKAWGFNAFVRAYFAYLDQRSAFVSSEVKKQKNKEGEVEGTLMEELEKLQKLQAMIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERIISGASAKKSNNGVVDGNEEEKAIVVRDFSASSIIESEKGLITVITHQWEVFDDDILVDVRGNNKVCNGVIGTTTTNPFEESYSLVPYVPHVAHNQVLPDLISL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1159 392 CDD ANTH_N_AP180_plant 33 148 - -
Lja4g1159 392 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Lja4g1159 392 Gene3D - 4 152 IPR008942 -
Lja4g1159 392 Gene3D ANTH domain 153 308 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lja4g1159 392 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lja4g1159 392 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 390 IPR045192 GO:0048268|GO:0072583
Lja4g1159 392 Coils Coil 167 187 - -
Lja4g1159 392 Pfam ANTH domain 32 290 IPR011417 GO:0005543
Lja4g1159 392 PANTHER OS08G0467300 PROTEIN 1 390 - -
Lja4g1159 392 SUPERFAMILY GAT-like domain 169 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1159 Lja-Chr4 10297838 10299615 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1159 4 10297838 10299615 Lja4g1159 4 10297838 10299615 ECH