LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g1134	ATGGCAATGCCATCAGGGAATGTGGTAGTGCAGGACAAAATGCAGTTTCCTAGTGGTGGTGGTGCTGGCAGTGGTGCTGGTAGTGAGATCCACCCGCACCACTACCGACAGCAGTGGTTTGTTGATGAGAGGGATGGGCTTATTGGTTGGCTGCGAAGCGAATTCGCAGCTGCCAATGCGATCATAGATTCCCTTTGTCATCATATGCGTGTGGTTGGTGACCCTGGGGAGTATGATGCTGTCATTGGGGCCATTCAGCAAAGGCGGTGTAATTGGAATCAGGTGCTGCTCATGCAGCAATACTTTTCTGTGGCTGAAGTGGTGTATGCGCTGCAGCAAGTGGCATGGAGGAAGCCGCAGAGGTATCTGGAACCAGTGAAAGTGGGTGCAAAGGATGTTAGGAAATCTGGTCCTGGATACCGGCAAGGGCAGAGGTTTGAGGCTCCAAAGCAAGCTTATAATTCTAGTACTGTGGAGTCTTATGGTCAGGAAGGGAATACTGTGGTTACTGGCGGTGCGGAGAAAGGGACTCCTGTAGCTGAGAAGACTGAACAACTTAATTCCGGGGGCGAGGTTGGGAAGATGGATGATAAGGGTTTAGCAACTGCTGAGGAAAAGAAAGATGCTCTAACAAAGCATCCAACTGATAGCAACTTGAAGAGCTCAGGGAGTTCTGAAGAATCTCTGTCCAACTCAGAATCTGAAGCTGCAGTTGCAACAGTTGTAAATGATGGACGTGTGTCAAATTCTAAAGAGAATGATTCCCATTCTATGCAAAATCAAAATCAGAGCCCAAGTCTTTCAACTATGGCAAAAACGTTTTTTGGCAATGAGATGTTTGATGGGAAGATGGTGAATGCGATTGATGGACTGAAGTTGTATGAAGGTTTAATTGATGGAACTGAAGTTTCAAAACTTGTTTCATTGGTTAATGATCTAAGGGTCAGCGGAAAAAAAGGACAATTGCGAGGAAGTCAGACATACATAGTTTCGAAAAGGCCCATGAAAGGGCATGGAAGGGAGATGATTCAGTTAGGTGTTCCCATTGCTGATACACCTCCAGATGGGGAAAATATGACAGGAGCCTCCAAAGAGATGAATGTAGAATCTATTCCTTCCTTCTTTCAAGATATTATTGAGCGTATGGTTTCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATAATGAGGGCGATCACTCACATCCCTACAATTGGCCACATTGGTATGGAAGGCCTGTCTATATCCTTTCCCTGACAGAATGTGATATGACTTTTGGAAGAGTAATTTCCTCAGACCATCCAGGGGATTACAGGGGCTCTCTGAAGCTTTCTCTTCTCCCTGGGTCTCTTCTGTCAATGCAAGGGAAATCTACTAATTTTGCTAGATATGCTATTCCTTCTATCCGCAAACAACGCATACTTGTTATTTTTACAAAGTCCCAACCAAAGAAGTCACTGTCAAGTGATGCTCAACGTTTTACCTCATCAGCAGCATCTTCTCATTGGGGTCCACCGCCAAGCCGTTCCCCCAATCACGTTCGTCATCATTTAGGCCACAAGCATTATGCTTCAGCTCCAACAAACGGAGGACTGCCAGCTCCACCAATCCGGCCACAAATTCCTGCTCCAAATGGTATGCAGCCATTGTTCGTACCCGCACCAGTTGTGCCTCCGATGCCATTCCCTGCACCTGTGCCAATCCCACCGGGTTCTGCAGGCTGGACCACAGCTCCTCCAAGGCACCCCCCTCCTCGGATCCTTGCTCCTGGCACAGGAGTCTTCCTACCTCCGCCCGGCTCAGGTAATTCATCTCAACCGTTACCAGGTACTTTGGCTGAAGTGAACCACCAAACTGTGGAAACTCCAACCTTACAGGAAAAGGAAAATGGGAAGGCTAATCACATTGTTTCCCCAAAAGGGAAAAGGCAAGAATGCAATGGACATGGGGTCGATGGAACTCAAGTTGAACAAGGTGTAGGGACACTAAAGGATAGTGATGAGAAAGCTGCAGCAAGTCATTGA	2040	0.4706	MAMPSGNVVVQDKMQFPSGGGAGSGAGSEIHPHHYRQQWFVDERDGLIGWLRSEFAAANAIIDSLCHHMRVVGDPGEYDAVIGAIQQRRCNWNQVLLMQQYFSVAEVVYALQQVAWRKPQRYLEPVKVGAKDVRKSGPGYRQGQRFEAPKQAYNSSTVESYGQEGNTVVTGGAEKGTPVAEKTEQLNSGGEVGKMDDKGLATAEEKKDALTKHPTDSNLKSSGSSEESLSNSESEAAVATVVNDGRVSNSKENDSHSMQNQNQSPSLSTMAKTFFGNEMFDGKMVNAIDGLKLYEGLIDGTEVSKLVSLVNDLRVSGKKGQLRGSQTYIVSKRPMKGHGREMIQLGVPIADTPPDGENMTGASKEMNVESIPSFFQDIIERMVSSQVMTVKPDACIVDFYNEGDHSHPYNWPHWYGRPVYILSLTECDMTFGRVISSDHPGDYRGSLKLSLLPGSLLSMQGKSTNFARYAIPSIRKQRILVIFTKSQPKKSLSSDAQRFTSSAASSHWGPPPSRSPNHVRHHLGHKHYASAPTNGGLPAPPIRPQIPAPNGMQPLFVPAPVVPPMPFPAPVPIPPGSAGWTTAPPRHPPPRILAPGTGVFLPPPGSGNSSQPLPGTLAEVNHQTVETPTLQEKENGKANHIVSPKGKRQECNGHGVDGTQVEQGVGTLKDSDEKAAASH*	680

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g1134	679	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	1	663	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	197	214	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	491	520	-	-
	Lja4g1134	679	Gene3D	-	275	493	IPR037151	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	148	167	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	133	267	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	215	267	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	633	679	-	-
	Lja4g1134	679	MobiDBLite	consensus disorder prediction	491	512	-	-
	Lja4g1134	679	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	1	663	IPR044842	GO:0003729\|GO:0006402\|GO:0032451
	Lja4g1134	679	SUPERFAMILY	Clavaminate synthase-like	281	479	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja4g1134	Lja-Chr4	10009653	10015829	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g1134	4	10009653	10015829	Lja4g1134	4	10009653	10015829	ECH