Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1132 ATGCGTTCTTACAGTACCACAATTTTGGCACACTTGTTTGGCATTCTTGCCATCATCCTCTTGCTTGTTTGGTTGCTGCATTACCGCGAGGGAATTGAATATGATTCTGACAATCCACTTCGCGTTTTCAATGTTCACCCTTTTATGATGTTCTTCGGTTTCATCTTCCTTGTTGGTCAAGCAATACTGTCATACCAAACTGTACCAGCACCACATCAAACACAGAAGGTGGTTCACATGACACTTCATTTCATTGCTCTAATTCTTGGGATTGTTGGCATTTGTGCTGTTTTCAAGTTCCATGATATGGTGAACTTGGAGGATGTTTACAGTCTCCATTCTTGGATTGGCCTTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTTGGACTGCTGTTTATGCTTCCAGCATCTCCTCAAACAAGATCCGCGGTGGCTCCATGGCACAGAGCTGGTGGCAGAGCACTATTTTCCATGGCAATCGTTGCTGCATTAACAGGCTTGATGGAGAAGTCCACTGTGTTGAAACTGGCGCCTCACCAGAGAGAATCTCATTTGATTAACTTCACGGGTCTAGCAATTCTCTTGTTTGGAGTTTTTGTGGAACTATCAGTTGGATTGGTTTGA 630 0.4397 MRSYSTTILAHLFGILAIILLLVWLLHYREGIEYDSDNPLRVFNVHPFMMFFGFIFLVGQAILSYQTVPAPHQTQKVVHMTLHFIALILGIVGICAVFKFHDMVNLEDVYSLHSWIGLGTFCLFGLQWLFGLLFMLPASPQTRSAVAPWHRAGGRALFSMAIVAALTGLMEKSTVLKLAPHQRESHLINFTGLAILLFGVFVELSVGLV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1132 209 CDD Cyt_b561_ACYB-1_like 36 177 - -
Lja4g1132 209 Gene3D - 1 207 - -
Lja4g1132 209 PANTHER CYTOCHROME B561-RELATED 3 208 IPR043205 GO:0016491
Lja4g1132 209 SMART 561_7 45 169 IPR006593 -
Lja4g1132 209 Pfam Eukaryotic cytochrome b561 45 174 IPR006593 -
Lja4g1132 209 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 208 - -
Lja4g1132 209 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1132 Lja-Chr4 9981962 9983681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1132 6 208 Chloroplast and Mitochondria Gene Families AT1G14730 63.902 1.19e-90 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1132 4 9981962 9983681 Lja4g1132 4 9981962 9983681 ECH