Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0926 ATGTCTAGCCAGCTTCAAAATGGTTCACCTCATGGATCCTCATCATCATCACAACCACCATCCAATCAACAACAACATCATCATCATCGACAAGTCCAATCGCAACCGCAACAGCAGCCGCTAAGCCGATATGAGTCACAAAAACGACGAGATTGGAACACCTTTGGGCAATACTTGAAGAATAGGACTCCCCAAGTTCCACTCTCTCAGTGCAACTTCAACCATGTTCTTGATTTCCTTCGCTACCTTGACCAATTTGGGAAGACTAAGGTCCACTCGCACGGTTGCATCTTCTTTGGCCAACCTTCCCCGCCCGCACCCTGTGCCTGCCCTCTCAGGCAGGCTTGGGGCAGCCTGGATGCACTCATCGGCCGCCTTCGAGCCGCCTATGAGGAGCATGGTGGCTCGCCAGACACCAACCCCTTTGGTGCCGGAGCCATTCGTCTCTACCTGCGTGAGGTGAAGGAGTGCCAAGCAAAGGCAAGAGGGATCCCATACAAGAAGAAGAAGAGGAAGAAGAATAATTAA 528 0.517 MSSQLQNGSPHGSSSSSQPPSNQQQHHHHRQVQSQPQQQPLSRYESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPSPPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARGIPYKKKKRKKNN* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0926 175 ProSiteProfiles ALOG domain profile. 43 170 IPR006936 -
Lja4g0926 175 MobiDBLite consensus disorder prediction 1 43 - -
Lja4g0926 175 Pfam ALOG domain 34 156 IPR006936 -
Lja4g0926 175 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 8 174 - -
Lja4g0926 175 MobiDBLite consensus disorder prediction 1 47 - -
Lja4g0926 175 PANTHER PROTEIN G1-LIKE2 8 174 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0926 Lja-Chr4 7868825 7874181 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0926 4 7868825 7874181 Lja4g0926 4 7868825 7874181 ECH
Lja6g2957 6 58508063 58513036 Lja4g0926 4 7868825 7874181 ECH
Lja3g3760 3 74232998 74235522 Lja4g0926 4 7868825 7874181 ECH
Lja3g4878 3 90853336 90855823 Lja4g0926 4 7868825 7874181 ECH
Lja3g2979 3 54781015 54781578 Lja4g0926 4 7868825 7874181 ECH