Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0828 ATGGGTAAAGGACCATTCTCCTTTCGCCGCTCATCCTCCCGCCGCCGCTCTAAGAAGGCCACGCTGCCGCCACAATCGCCGCCGCTCCATGCGACCGAAATTTCCGGCTCGCCGGTCGATAACCGCTTGGTCCTCGGCGGCGGTAGCAGCGGTACGGTAACGAAGGCGAAGAAGAAAACCGGCGGTGCCAGGCTGTGGATGCGGTTGGACCGGGCGGGGAAGTCGGAGCTCGTGGAGTGGGATAAGAACGCGATCATCCGCCATGCGTCGATTCCCGCCAGAGACTTGAGGATTTTGGGCCCTGTCTTCTCTCATTCCTCCAATATCCTCGCGAGGGAGAAAGCGATGGTGGTTAATTTGGAGTTTATAAAGGCTATTGTAACTGCTGAAGAAGTGCTTTTGCTTGATCCTCTTCGCCAGGAGGTTCTTCCGTTTGTTGAGCAGCTCAGGCAACAGCTTCCGCATAAAAATCAGCCTAAACAGCTTCTAGGGCCTGCAGATGAACAGGAGAGTGAAATGCAGGTTTCTACTGGCAGACAATGGTTACCTGTGCCGGAGGCTGCGGAAGGTTTGCAGTCAGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAAGTTGTCTGCACGTATCTGGACTCGAATGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTTTTAGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTCGAACATGTGCGGAGTTTGAAGAGCAATCTTACTCGTTTGCTCGCACGTGTGCAAAAGGTGAGAGATGAAATTGAACATCTATTAGATGACAATGAGGACATGGCACAACTATATTTGACTAGGAAGTGGTTGCAGAATCAACAATTTGAGGCTAATTTGGGAGCAACAACCTCATATAACCTTCCAAATAATGCACATGTTCGCCGAGTTGGTTCTACCAAAAGTGGAAGCCTTGTGACCAGCAACTATGAGGATGATAACGATGTGGAGGACTTGGAGATGTTGCTTGAAGCGTATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCGGTTAGAGAATACATCGATGACACCGAAGACTATGTCAACATCCAACTTGATAACCATAGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCCTTTGCTATTGCTGTTGAAACTTTGATAGCCGGTGCATTTGGTATGAATATTCCTTGCCATTTATATAACACTCAAGGAATATTCTGGCCTTTTGTGGGGATCATTTCTGCAGCTTGCGTATTGCTTTTCCTGCTTGTCTTAGCATATGCTAAATGGAAAAAGTTGCTGGGATCGTAA 1335 0.4764 MGKGPFSFRRSSSRRRSKKATLPPQSPPLHATEISGSPVDNRLVLGGGSSGTVTKAKKKTGGARLWMRLDRAGKSELVEWDKNAIIRHASIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKNQPKQLLGPADEQESEMQVSTGRQWLPVPEAAEGLQSELPFEFQVLEIALEVVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEANLGATTSYNLPNNAHVRRVGSTKSGSLVTSNYEDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIAGAFGMNIPCHLYNTQGIFWPFVGIISAACVLLFLLVLAYAKWKKLLGS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0828 444 MobiDBLite consensus disorder prediction 1 40 - -
Lja4g0828 444 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 444 - -
Lja4g0828 444 Gene3D - 52 137 - -
Lja4g0828 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 440 - -
Lja4g0828 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 444 IPR039204 -
Lja4g0828 444 Gene3D Magnesium transport protein CorA, transmembrane region 138 375 - -
Lja4g0828 444 Coils Coil 243 277 - -
Lja4g0828 444 CDD Mrs2_Mfm1p-like 66 441 IPR039204 -
Lja4g0828 444 Pfam CorA-like Mg2+ transporter protein 323 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja4g0828 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 432 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0828 Lja-Chr4 6893078 6896675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0828 1 444 MRS2 Gene Family AT3G58970 67.411 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0828 4 6893078 6896675 Lja4g0828 4 6893078 6896675 ECH
Lja4g0828 4 6893078 6896675 Lja6g0948 6 21120768 21125455 PCT