Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0118 ATGCAACCACCACCGTACGATCACCCCGCCGCCACTGGTTACCCGGTGAGCTATGGCAGCTACAACAACCCGGTTCCCCCGCCTCAGACAGCTGCACCGCCATCTCACCACCGGAAAGCTCAGGAAGATTGGTCCACAGGCCTCTGTGACTGCTCCTCCGACGTCAAAACCTGTTGCATAACGTGTTGGTGTCCATGTGTCACGTTTGGCCGAGTTGCAGAGGTTGTTGATCAAGGATCAACTTCATGTGGTGCAAGTGGTGCTTTGTACACACTGATTATGTGTGTGCTTGGTTGCGGTTGCTTGTACTCATGCTTCTACCGTTCCAAGTTGAGACGCCAATACATGTTGAAGGAGAGTCCTTGTTCTGATTGCTTGGTTCATTGCTGCTGCGAGTCATGCGCCTTGTGCCAAGAGTATCGTGAGCTTGAAAATCGTGGATTTGACATGACCTTAGGGTGGCACGGAAATGTTGAGCGCAACCGGGGAGTAGCCATGATTCCATTTCCATCAGCTCCAGGAGTTGAACACATGAATCGTTGA 543 0.5193 MQPPPYDHPAATGYPVSYGSYNNPVPPPQTAAPPSHHRKAQEDWSTGLCDCSSDVKTCCITCWCPCVTFGRVAEVVDQGSTSCGASGALYTLIMCVLGCGCLYSCFYRSKLRRQYMLKESPCSDCLVHCCCESCALCQEYRELENRGFDMTLGWHGNVERNRGVAMIPFPSAPGVEHMNR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0118 180 PANTHER PLAC8 MOTIF-CONTAINING PROTEIN-RELATED 33 168 - -
Lja4g0118 180 Pfam PLAC8 family 44 142 IPR006461 -
Lja4g0118 180 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 43 145 IPR006461 -
Lja4g0118 180 PANTHER DUF614 FAMILY PROTEIN-RELATED 33 168 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0118 Lja-Chr4 908024 909602 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0118 4 908024 909602 Lja4g0118 4 908024 909602 ECH