Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0116 ATGGAAGAGTCTTCCAAGGCTTTCTCCTCTCTAAGCATCACAGTTGAAAAAGGCCAAGCACAAACAGAACAAGAACCTCCTCATGAAGCCTTGTTTCTTGTCTTAACATACCTTCCAGTGTACCAGGTTCTAGCCATGTCTCAGGTTTGCAAAGCACTAAGGGATGCAGTTAACAATGATGTGTTGCCATGGCTGAATGTTATTGTTGAAAGGCCTCTGAGTTCAAGGCTCTCTGATGAGATTCTAGTGAAAATCACTTCCAAGGCCAATGGAAGGCTCAAAACTCTGGCTTTGATGAACTGCACCCACATCACTGACAAGGGGCTCCAAAGGGTCGTTGAACAAAACCCCCTCATCAACAAGCTGCATATACCAGCATGCACCGGCATAACCGCTGAAGGAGTTACAAGAGCAGTGCAAACATTGTGCCAAAGAAGCAACTGCTTAAGCACATTACGCATAAACGGCATCTACAACCTACAGAAGGAGCATCTAGACATGCTTGCCATGAACCTCAGAAAGAACGTTCCATTAGAGGAGCAGCAAATGCAGAAGCCTAACTACTATCATAAACGCGGAAGCTTTACAGTGTTTAGCCGCGAAGAAAACCAGAGGATTATTGATTTGGAGACATGTCCCAAGTGCTTTGAGGTGACGATGGTCTATGACTGTCCAAAAGTGGAATGCATGAAGAGGGAAAAGCCCCAAGTTCAATGTAGGGGATGCAAATTTTGTATTCCAAGGTGTGAAAACTGTGGTGGATGTGTTGGATCTGAAGAAGAGGAAGAAGCTGCATGTGCAGATATCTTGTGCCTTGAATGTTGGTTGCAGCTTCCCAAGTGTAATTTCTGTAATAAACCATATTGTAAACAACATGAAAATTGGTGGTGCTCTTCCTTAGACCCTATATTCCTCTGCAGAGTTTGTGATGAACATTCTCATGGATATACATACACTGATGTTCTATAG 969 0.4365 MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCRGCKFCIPRCENCGGCVGSEEEEEAACADILCLECWLQLPKCNFCNKPYCKQHENWWCSSLDPIFLCRVCDEHSHGYTYTDVL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0116 322 Gene3D - 24 62 - -
Lja4g0116 322 ProSiteProfiles F-box domain profile. 20 67 IPR001810 GO:0005515
Lja4g0116 322 SUPERFAMILY F-box domain 27 71 IPR036047 GO:0005515
Lja4g0116 322 Pfam F-box domain 27 62 IPR001810 GO:0005515
Lja4g0116 322 SUPERFAMILY RNI-like 80 179 - -
Lja4g0116 322 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 15 314 - -
Lja4g0116 322 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 239 250 IPR017900 -
Lja4g0116 322 PANTHER F-BOX PROTEIN SKIP28 15 314 - -
Lja4g0116 322 Gene3D Ribonuclease Inhibitor 69 245 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0116 Lja-Chr4 894792 896699 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0116 4 894792 896699 Lja4g0116 4 894792 896699 ECH