Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0111 ATGGTTCTTCTTCTTCGTCTCCTCTTCATTCTCACACTCTCAGCCATCACAACCCCTTCAACTTCATCATCAATAGACACTTTCATCTTCGGCGGTTGCTCTCAGCCCAAGAACACGCCGGTTTCCGACCCCGTCTACGAAACCGGTGTCAACTCGCTCCTCACCTCCCTCGTCAACTCAGCCTCCTTCACCAACTACAACAACTTCACCGTCCCGGCCACCGCCGGCTCCGGCGACACCCTCTACGGCCTCTACCAGTGCCGTGGGGACCTCAACAACGACCAGTGCTACCGCTGCGTGGCGCGCGCGGTAAGCCAACTCGGCACCCTCTGCTCCGCCGTGCGCGGCGGCGCGTTGCAGCTGGAGGGGTGTTTCGTCAAGTACGACAACGTTAAGTTTCTTGGGGTGGAGGACAAGACTATGGTTGTGAAGAAATGTGGACCGTCGATTGGGTTGACTTCTGATGCGTTGACCCGGAGGGATGCTGTGCTGGCGTATTTACAGACGTCGGATGGGGTTTACAGGACGTGGAGGATCAGCGCCTATGGGGATTTTCAGGGTGCGGCGCAGTGCACCGGGGATTTGAGTCCCTCCGAGTGCCAGGATTGTCTCTCTGAGTCGATCCAACGGTTGAAAACTGAGTGTGGGGCCTCCACATGGGGGGAGATGTACTTGGCAAAGTGCTACGCGCGCTACTCCGAAGGTGGGGATCACTCGCGCCACAGTGACGATGATAGCAATCACAATGACGATGAGATTGAGAAGACACTGGCCATATTAATTGGACTAATTGCTGGGGTTGCTCTAATCATCGTTTTTCTTTCCTTCTTGTCCAAGGTGTGCGAAAAGCAGAGAGGTGGAAAATCATGA 870 0.5529 MVLLLRLLFILTLSAITTPSTSSSIDTFIFGGCSQPKNTPVSDPVYETGVNSLLTSLVNSASFTNYNNFTVPATAGSGDTLYGLYQCRGDLNNDQCYRCVARAVSQLGTLCSAVRGGALQLEGCFVKYDNVKFLGVEDKTMVVKKCGPSIGLTSDALTRRDAVLAYLQTSDGVYRTWRISAYGDFQGAAQCTGDLSPSECQDCLSESIQRLKTECGASTWGEMYLAKCYARYSEGGDHSRHSDDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQRGGKS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0111 289 ProSiteProfiles Gnk2-homologous domain profile. 134 237 IPR002902 -
Lja4g0111 289 Pfam Salt stress response/antifungal 184 233 IPR002902 -
Lja4g0111 289 Pfam Salt stress response/antifungal 38 130 IPR002902 -
Lja4g0111 289 Gene3D - 158 235 IPR038408 -
Lja4g0111 289 Gene3D - 26 133 IPR038408 -
Lja4g0111 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 285 - -
Lja4g0111 289 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 4 285 - -
Lja4g0111 289 ProSiteProfiles Gnk2-homologous domain profile. 26 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0111 Lja-Chr4 856980 860142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0111 73 232 Receptor kinase-like Gene Family AT4G23280 27.907 2.43e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0111 4 856980 860142 Lja4g0111 4 856980 860142 ECH