Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0106 ATGGTTTGCTTGGTATCACGCTCAGGAAGGGAGTTGCAAAGATACAACAACATGGGTGGCCGCCAAGTAGTCGGATGTATACCTTATAGATATAAAGAAGACATAGATGGTAACATGAGCAACGAATTGGAAGTACTAGTGGTTAGTTCACAAAAAGGTCAAGGATTGATGTTTCCCAAGGGAGGATGGGAAATTGATGAATCTGTAGAAGAAGCAGCTATCAGGGAATCCCTTGAAGAAGCTGGAGTCATAGGAACCGTTGAGGGTGAATTGGGCCAATGGAATTTCATTAGCAAAAGATATGGCATATATTATGAAGGGCACATGTTCCCATTGTTTGTGAAGGAACAGCTTGATCAGTGGCCTGAGAAGAATCTTCGAAGAAGAGTGTGGATGACAGTTGCTCAAGCTAGAGAAGCTTGTCAGCATTGGTGGATGAAAGAAGCATTGGACATTTTGGTTCAACGACTCGTTTCTTCACAACAACAGAAAAAGAGATATAGCATTTGTTGA 513 0.4191 MVCLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDIDGNMSNELEVLVVSSQKGQGLMFPKGGWEIDESVEEAAIRESLEEAGVIGTVEGELGQWNFISKRYGIYYEGHMFPLFVKEQLDQWPEKNLRRRVWMTVAQAREACQHWWMKEALDILVQRLVSSQQQKKRYSIC* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0106 170 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Lja4g0106 170 Pfam NUDIX domain 44 149 IPR000086 -
Lja4g0106 170 CDD Nudix_Hydrolase_9 22 147 - -
Lja4g0106 170 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Lja4g0106 170 SUPERFAMILY Nudix 14 156 IPR015797 -
Lja4g0106 170 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 166 - -
Lja4g0106 170 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Lja4g0106 170 PANTHER NUDIX HYDROLASE 17, MITOCHONDRIAL 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0106 Lja-Chr4 824859 826662 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0106 4 824859 826662 Lja4g0106 4 824859 826662 ECH