Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0099 ATGGCCGACGCTCTCTCGTTGATTCCGGCAGCCGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGGAAGAATGCTGCTCTTGAGATTGAGGGGATAGTGAAGCAGCTAGCTACTGGTGGTGATCATGATAAGATAGCGGCTGTGGTCAAATTGTTGACTACTGAATTCACATTCTCACCACAAGCCAATCAGAGAAAGGGAGGATTGATTGGATTAGCTGCTGCAACTGTTGGGTTGGCTTCTGAAGCAGCTCAGCATCTTGAGCATATTGTGCCCCCGGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCTCTATATAACATTGCTAAGGTTGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATTTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGACGCCAATGTACAAAGTGCTGCGCACCTCTTAGATCGACTTGTGAAGGATATCGTGACTGAAAGTGATCAATTCAGTATTGAGGAATTTATACCGCTGCTAAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTGGGATGGATTACGGTATTGGACAGTGTCCCAGATATCGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTCCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGCTCTCCAGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACAAATGAAGAGCTACGCACCATCAAGGCTGATCCAGCTGAAGGGTTTGATGTAGGAGCAATTCTCTCCATTGCTAGGAGGCAATTATCTAGTGACTGGGAGGCTACTCGAATTGAAGCTCTGCACTGGATATCAACCCTTTTAAACAAACATCGTACTGAGGTTTTGCAGTATCTAAATGACATATTTGACTCCCTGCTGAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTTGATGTTCATGCATGCATTGCAAAAGATCCTCAGCACTTTCGGCAGCTTGTTGTTTTCCTGGTGCACAATTTCCGGATAGACAACTCTCTTTTGGAAAAGCGTGGTGCTTTAATAATTCGTCGACTTTGTGTGCTTTTAAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCCGACTTGGATTTTGCATCAATTATGGTTCAGGCATTGAATTTGATCTTACTTACATCATCGGAACTATCTGAGATTAGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCCGGGAAGGATTTATATGTTTCTTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTTTGCTTATTAGCTCAGACTTACCAACATGCAAGTACTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTCAAACTCTTAGTCCAGCTGGACAAATTGATTCGCTTGCTGGAAACTCCAGTCTTCACTTATCTTAGATTGCAGCTTCTCGAACCTGGAAGATATCCATGGTTGTTTAAAGCCTTGTATGGTCTTCTCATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCGTTTTCTTTCAATGGTGAGCAATTGAAGAAAACATCCTCAGGGAATCCCTATCAATTTCTACACCACATGTCTGGTGGATCTCATACTTCTGAGGATGGTGACATAACTGCTGATAGTGGGAACTCACACAACGGGATAAATTTTGCTGCAAGGCTACAACAGTTTCAACAAATGCAGCGCCAGCATCGTGTGCATATGAAAGTACAGACACTGTCTCGCAAAAATTCCCCTTCCTTGTCCAAGGAGGCACAAAAACCGGAAGAACCAAAGCGACCACCGCAGTTGAGTGAGCTTAATATTCCTCCTTCAAGATCATCCAAGAGAGGTCCAGTGTAG 2166 0.4266 MADALSLIPAAVLRNLADKLYEKRKNAALEIEGIVKQLATGGDHDKIAAVVKLLTTEFTFSPQANQRKGGLIGLAAATVGLASEAAQHLEHIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRTIKADPAEGFDVGAILSIARRQLSSDWEATRIEALHWISTLLNKHRTEVLQYLNDIFDSLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLVHNFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASTVIQSLVEEDINVKLLVQLDKLIRLLETPVFTYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSFSFNGEQLKKTSSGNPYQFLHHMSGGSHTSEDGDITADSGNSHNGINFAARLQQFQQMQRQHRVHMKVQTLSRKNSPSLSKEAQKPEEPKRPPQLSELNIPPSRSSKRGPV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0099 721 Gene3D - 125 251 IPR011989 -
Lja4g0099 721 MobiDBLite consensus disorder prediction 624 653 - -
Lja4g0099 721 Gene3D - 1 124 IPR011989 -
Lja4g0099 721 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lja4g0099 721 PANTHER PROTEIN VAC14 HOMOLOG 4 693 - -
Lja4g0099 721 Gene3D - 252 479 IPR011989 -
Lja4g0099 721 SUPERFAMILY ARM repeat 3 544 IPR016024 -
Lja4g0099 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lja4g0099 721 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lja4g0099 721 MobiDBLite consensus disorder prediction 669 689 - -
Lja4g0099 721 MobiDBLite consensus disorder prediction 669 721 - -
Lja4g0099 721 PANTHER TAX1 BINDING PROTEIN-RELATED 4 693 IPR026825 GO:0006661|GO:0070772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0099 Lja-Chr4 739409 747138 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0099 4 739409 747138 Lja4g0099 4 739409 747138 ECH