Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0092 ATGGCGACGATGACGAGCTTGATCGGTCTTATCAATAAGATCCAACGAGCCTGCACCGTCTTGGGCGATCACGGCGGTGAGGGCTTGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGTGGACAGAGTTCAGGGAAATCGTCAGTGCTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTAACACGGAGGCCGCTAGTGCTGCAACTTCATAAGGTCGAACAAGGGCAGCAGGAGTATGCTGAGTTTCTTCACATGCCAAGAAAGAAATTCACAGACTTTGCTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGTATAACTGGAAAGACAAAAGCAATTTCTAACATTCCAATTCAACTCAGCATTTATTCGCCAAATGTTGTGAACTTAACCCTCATAGATCTTCCTGGGTTGACGAAGGTTGCAGTAGAGGGACAACAGGACAGTATTGTTCAAGATATTGAAAACATGGTCCGTTCGTATATTGAGAAGCCAAATTGCATTATCTTAGCTATTTCTCCTGCCAATCAAGATATTGCCACTTCAGATGCCATAAAAATTGCAAGGGAAGTTGATCCTTCAGGTGAAAGAACATTTGGTGTGGTTACAAAACTTGATCTTATGGACAAAGGAACAAATGCAGTTGATGTTCTTGAGGGAAGGTCATACAGACTGCAGCACCCATGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAAAATGTTGATATGATTGTTGCTCGTAGAAAGGAACGTGAATATTTTGAGACAAGTCCGGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAACAAGTTATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAACAAGACCATTGACGAGCTTAATGCCCAGTTGGACCTTATTGGCAGGCCGATTGCTGTGGACTCCGGGGCCCAACTATACACCATTTTAGAGATGTGTCGTGCTTTTGACAAAGTATTTAAGGAACACCTAGATGGAGGACGTCCTGGAGGTGATCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAAAAAAACTCCCCTTCGATCGTCATCTGAACTTAAAAAATGTGCAGAGAGTTGTGACAGAAGCTGATGGGTATCAGCCCCATCTCATTGCTCCAGAACAGGGTTATAGAAGACTTATTGAAGGGTCTATCGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGTGGATGCTGTCCATTTTGTCTTAAAAGAACTTGTACGGAAGTCAATTGCAGAAACTGAGGAATTAAAAAGATTTCCTACGCTTTCAAATGATATAGCAACCGCTGCAAATGACGCTCTAGAAAGATTCCGTGACGAAAGCAGGAAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTTACAGTGGAATTTTTCAGGAAGATTAATCTTGAACCAGAAAAGAATCCAAACGGACCACCAAATGCAAATCGGAATGCTCCTCCCCCCACTATGGACAATTATACTGACACTCACCTCCGCAAGATTGGATCAAATGTAAATGCATATATTAACATGGTCTGTGATACGCTTAAGAATACTATACCAAAGGCCGTAGTTTATTGTCAAGTTAGAGAGGCCAAGAGATCATTGCTGAACTACTTCTACGTTCAAGTTGGGAAGAAGGAGAAGGAGAAATTGGGAGCTATGTTGGATGAAGACCCAGCTCTTATGGAAAAGAGAACACAAATAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGATATTGACTCCGTGGCTTGGAAATAA 1857 0.4286 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKVEQGQQEYAEFLHMPRKKFTDFAAVRKEIADETDRITGKTKAISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQQDSIVQDIENMVRSYIEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAQLDLIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLNLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLSNDIATAANDALERFRDESRKTVTRLVDMESSYLTVEFFRKINLEPEKNPNGPPNANRNAPPPTMDNYTDTHLRKIGSNVNAYINMVCDTLKNTIPKAVVYCQVREAKRSLLNYFYVQVGKKEKEKLGAMLDEDPALMEKRTQIAKRLELYKQARDDIDSVAWK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0092 618 PANTHER DYNAMIN 4 618 IPR022812 -
Lja4g0092 618 Pfam Dynamin central region 222 489 IPR000375 -
Lja4g0092 618 Pfam Dynamin family 38 213 IPR045063 -
Lja4g0092 618 Gene3D - 4 310 IPR027417 -
Lja4g0092 618 ProSiteProfiles GED domain profile. 527 618 IPR020850 -
Lja4g0092 618 SMART GED_2 522 615 IPR003130 GO:0003924|GO:0005525
Lja4g0092 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Lja4g0092 618 Pfam Dynamin GTPase effector domain 523 615 IPR003130 GO:0003924|GO:0005525
Lja4g0092 618 PRINTS Dynamin signature 60 77 IPR022812 -
Lja4g0092 618 PRINTS Dynamin signature 35 53 IPR022812 -
Lja4g0092 618 PRINTS Dynamin signature 133 150 IPR022812 -
Lja4g0092 618 PRINTS Dynamin signature 202 218 IPR022812 -
Lja4g0092 618 PRINTS Dynamin signature 183 201 IPR022812 -
Lja4g0092 618 PRINTS Dynamin signature 225 244 IPR022812 -
Lja4g0092 618 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Lja4g0092 618 PANTHER BNAA09G45430D PROTEIN 4 618 - -
Lja4g0092 618 MobiDBLite consensus disorder prediction 498 518 - -
Lja4g0092 618 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Lja4g0092 618 Gene3D Dynamin, middle domain 334 595 - -
Lja4g0092 618 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lja4g0092 618 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0092 Lja-Chr4 692233 699369 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0092 4 692233 699369 Lja4g0092 4 692233 699369 ECH