Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0085 ATGGGTGAAGGCATAGTTGAGAAGGCTTTAAACAGCTTAGGAAAAGGCTTCGACTTGACCTCAGATTTTAGGCTCAAATTCTGCAAAGGTGAAGAGCGTTTGGTTATTCTCAATGAAACAGAGAGAAGAGAGCTCACAGTGCCAGGTTTTGGACCTGTGACAGATGTCTCTGTTGACATCAAATGTGATAAAGGCGACCTCACCCGGTACCAATCTGATATTCTCAGCTTCACCCAAATGTCTGAGATGTTCAATCAGAAAAGCTCAATCCCAGGGAAAATTCCATCTGGGTACTTCAACACTGTGTTTGGATTTGAAGCTGGTTCATGGGCAAGTGATGCAGCTAACACCAAGTTCTTGGGTCTTGATGGATATGTTATCAAACTATTCAATGTTCATATTGATCGTTACCCTCTTGTTCTCTCCAAACAAGTCATTGAAGCTGTGCCTTCTTCATGGGATCCTACTGCACTTGCAAGATTTATTGAGAAATTTGGGACACACATCCTTGTGGGGCTTAGCATTGGTGGCAAAGATTTAGTGCTGGTCAAGCAAGATGTATCTTCCAACTTGGAACCGTCAGAGTTAAAGAAGAACTTGGATGAGCTAGGAGATCAGTTATTCACTGGAACTTGCAATTTTCTTCCAAAAACCAAAGACCAAAAACACAAGGTACCACCTGCTTTTGATGTCTTTGGTCCTCAAATTGTTGCCTTCAATAACTCTACATGCGTTTGTGCAAAAGATGGAATAACAGTGATATGTGCAAAGAGGGGAGGGGATACTCAAGTGAGCAACCATAGTGAATGGCTTCTTACAGTTCCTAACAAGCCTGATGCTGTTGATTTTAGCTTCATTCCCTTCACTTCTCTTCTTAAAGCTGCTCCTGGCAGGGGTTTCCTATCCCATGCCATCAACCTTTATCTTAGATATAAGCCTCCTCTGTCAGATTTGCCTTACTTTCTTGACTACCAAGCACACAGGCTTTGGGCTCCCATTCACAATGATCTTCCTCTTGGTCCAGTTTCCAACAGAACCACTCATTCACCTTCTCTCAGCCTCAACTTGATGGGTCCTAAGCTTTATGTAAACACTGCAAAGGTAACAGTGGGAAAAAGGCCAGTCACAGGAATGCGGTTGTTTCTTGAGGGCATGAAATGCAACAGATTAGCCATACACCTGCAATACCTACTAAACACACCAACAATGCTCAACAATAAAATAGAGGACACCACAACATGGTCAGAAGAAATCATTGATGACCGTTTCTTAGAAGCAATCAGTGGAAAGAAATTTTCTCATGTGTGCACAGCACCAGTGAAGTACAATCCCAGTTGGAGTTCTGATAAAGATGTTGCTTTCATAGTCACAGGAGTACAACTTCATGTGAAGAAACATGAATCAAGAAGTGTCCTTCATCTGAGACTATTGTTCTCCAAGGTGTCTAATGCTATTGTTGTAAAATCAAATTGGACACAGGGCTCAACACAAAGATCTGGATCTGGCTCTGGCTCTGGCTCTAGCGTTTTCTCAGCAATAAGCACATCTATTCAGGGTAAAGACCAGAAGAAACCAGCTCTAGTTGTTGTAGATTCTAGTGTTTTTCCAACAGGACCTCCAGTTCCTGTGCAAGCACAAAAGCTTTTGAAATTTGTGGACACTTCACAGTTATGTAAAGGCCCACAAGATAGTCCTGGACATTGGTTAGTTACTGGTGCAAGGTTGATGTTGGACAAGGGTAAGATATGTTTATGGGCTAAGTTCTCTTTGTTAAATACTAGTCCATGA 1788 0.4211 MGEGIVEKALNSLGKGFDLTSDFRLKFCKGEERLVILNETERRELTVPGFGPVTDVSVDIKCDKGDLTRYQSDILSFTQMSEMFNQKSSIPGKIPSGYFNTVFGFEAGSWASDAANTKFLGLDGYVIKLFNVHIDRYPLVLSKQVIEAVPSSWDPTALARFIEKFGTHILVGLSIGGKDLVLVKQDVSSNLEPSELKKNLDELGDQLFTGTCNFLPKTKDQKHKVPPAFDVFGPQIVAFNNSTCVCAKDGITVICAKRGGDTQVSNHSEWLLTVPNKPDAVDFSFIPFTSLLKAAPGRGFLSHAINLYLRYKPPLSDLPYFLDYQAHRLWAPIHNDLPLGPVSNRTTHSPSLSLNLMGPKLYVNTAKVTVGKRPVTGMRLFLEGMKCNRLAIHLQYLLNTPTMLNNKIEDTTTWSEEIIDDRFLEAISGKKFSHVCTAPVKYNPSWSSDKDVAFIVTGVQLHVKKHESRSVLHLRLLFSKVSNAIVVKSNWTQGSTQRSGSGSGSGSSVFSAISTSIQGKDQKKPALVVVDSSVFPTGPPVPVQAQKLLKFVDTSQLCKGPQDSPGHWLVTGARLMLDKGKICLWAKFSLLNTSP* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0085 595 Pfam MAC/Perforin domain 99 308 IPR020864 -
Lja4g0085 595 PANTHER OS02G0736300 PROTEIN 4 593 - -
Lja4g0085 595 SMART MACPF_8 117 310 IPR020864 -
Lja4g0085 595 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 593 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lja4g0085 595 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0085 Lja-Chr4 660250 667313 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0085 4 660250 667313 Lja4g0085 4 660250 667313 ECH