Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0074 ATGATGGGGCAGAATCTTTCACCAAAGGAAAGGAATAGAGATTGGATTAGAGCTCTTATGAGCAGTAGGTCTGGTTACTGTGATGAACACTTTGACCTTCGATCGAGTGAGAAGAATATTTTCTGTGTAGACTGTGCTGTTAGAGTTTGTAGGCACTGTAAGGAGGCTCATTCCCTCCACAGAAGCTTTCAGATATACAAATATTCCTATCAGGATGTTTTCCGCCATTCCGAGCTGCAGAAGTATTTCGACTGCGAGAATATTCAGACTTACATATCCAACAACGAAAGGATTGTGCATCTCAAACCCCGACCTGCAATTGGTAGACCTAAAGCTGTTGATCTATGCCCTGACTCAAAATCTAAAGATTACAACTTCTCAACAAAACTGAAATCAGGTGGTACTTGTGAAGAATGTGGAAAACACTTGCCAGATGAGCGAAATTGCTTCTGCTCCATTACATGCAAGATCTCAGCACTTCCAGTGGATCCCCAAAACCAAATTCAAAATCACCTTTCTCAAAGTAGTCCAGTAAAACTTGAAGCTATTGACTGCACTATGAATGATGCTCATCATTCAGAACCTGAGTCATCTATCTCTGAAGCTGAGTCATTTGGGTGGGTTGAAGTCATGAATTTCAGAAAGCGGCCCAGAAAGACCACCCCGCAGAGGCCTATCTTTGTTTTCACGTCTTAG 696 0.4224 MMGQNLSPKERNRDWIRALMSSRSGYCDEHFDLRSSEKNIFCVDCAVRVCRHCKEAHSLHRSFQIYKYSYQDVFRHSELQKYFDCENIQTYISNNERIVHLKPRPAIGRPKAVDLCPDSKSKDYNFSTKLKSGGTCEECGKHLPDERNCFCSITCKISALPVDPQNQIQNHLSQSSPVKLEAIDCTMNDAHHSEPESSISEAESFGWVEVMNFRKRPRKTTPQRPIFVFTS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0074 231 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Lja4g0074 231 Pfam PLATZ transcription factor 67 157 IPR006734 -
Lja4g0074 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 224 - -
Lja4g0074 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0074 Lja-Chr4 597924 600106 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja4g0074 PLATZ 6.7e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0074 4 597924 600106 Lja4g0074 4 597924 600106 ECH