Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0070 ATGTCTTTCCCAGCCATAGAGCGTGTTTATGTAACAGAGGACTGTGTTCGCGAATGGAAGACTGGCAATGCTGCCCTCAAGGTCTCTGAACCCGTCCCAATGCTTCGCTTTCTCTATGAGCTCTGCTGGACTATGGTTCGAGGTGAATTGCCGTTGCACAAGTGTAAAACAGCATTAGATTCTGTCATATTCTCAGAGAAAGCTTCGCCTGACAAAATAGCATCAAATTTTGCAGATATAGTCACCCAGATGGCTCAAGATCATACAATGTCAGGAGAGTTCCGTTCTCGTCTCATTAAACTGGCAAGATGGCTTGTTGAATCTGATTTGGTTCCAGTTCGGCTACTTCATGAACGTTGTGAGGAAGAATTTTTGGGGGAGGCTGAGTTGATCAAAATAAAGGCTCAGGAGTTGAAGGGAAAAGAGGTCAGAGTCAATACACGACTCCTTTACCAACAAACCAAATTCAATCTCCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTTACTCTTCTTTGTCGGGACTCTGAAGCGCCGACTCAAAAAACATCATCAACAATTGGCATTATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTCCTTGAGTGTTTTGAACTTCAACCCAATAACGATGTGTTCATAGAGCTGATTCCTATTTTTCCCAAGTCCCATGCTTCCCAAATTCTTGGATTTAAATTTCAATATTATCAGCGGATGGAAGTCAGCAATCCTGTTCCATTTGGACTCTATAGACTTACAGCCTTACTCGTGAAGCAAGATTTTATTGATCTTGATAGCATATATGCTCACTTACTCCCCAAGGATGATGAAGCATTTGAGCATTATAACACTTTCTCGTCCAAGCGTTTTGATGAGGCCAATAAAATTGGAAGAATAAACCTTGCTGCTACTGGAAAAGATCTAATGGACGAGGAGAAACAGGGGGATGTTACCATAGATCTTTTTGCTGCTTTAGACACGGAAACTGAAGCAATTGAAGAGCGAATGTCTGAGCTTCAAGACAGTCAAACTTTGGGCTTGCTTACTGGCTTTCTTGCTGTTGATGACTGGTATCACGCACATATACTATTTGAACGCCTCTCAACACTCAATGCAGTGGAACATACTCAAATATGTGATAGTTTGTTCAGGCTTATTGAGAAGTCAATTTCTTCAGCATATGATGTTATTCGTCAAGCACATGTTCAAAACCCTGGATCCTCCACAGGAGGCAGCACTGATGCTATGGATGTTGATAACTCCTCAGGACATGGTTCTTTTATAAATCTTCCAAAGGAGCTTTTTCAGATGCTTGCTTGCACTGGACCTTATCTCTACCGTGATACTATGTTGTTACAGAAGGTTTGTAGAGTGTTGCGAGGTTATTACCTTTCTGCTCTAGAGCTTGTAAATCGTGGTAATGGCGCCTTGAATCCTCAATCTCATGTTACTGGAAGCCCTCACCTACACCTTAAGGATGCAAGGCTAAGGGTGGAGGATGCTCTTGGAGCATGTCTACTACCTTCTCTACAGTTGATTCCTGCGAATCCAGCAGTTGGTCAGGAAATTTGGGAACTTATGAGTCTCCTTCCTTATGAGGTGCGATATCGCTTATATGGCGAGTGGGAAAAAGATGATGAGCGCATTCCTATGCTCTTGGCTGCAAGGCAAACTGCCAAGTTGGACACTAGACGTATTTTGAAACGGCTAGCGAAGGAAAATTTGAAACAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCAAACCCTATGACCGTCCTCCGTACAATTGTTCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTGGTTGATGCATTTAAGTATTTGACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATCGAGCGATTAGCACTTGGTGGACGTGATAAGTTAAAGGATGATGGGCTCAATTTGTCAGACTGGCTTCAATCTCTAGCGTCATTTTGGGGCCACCTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTTTTCCAGTATCTTGTGAACCAGCTAAAAAAAGGGCAAGGAATTGAGCTTGTTCTGCTGCAGGAGCTTATTCAGCAAATGGCAAATGTTCAGTACACTGAGAACTTAACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACTTCGTTTGGAGTAACTCGAAATAATAAGGCATTGGTAAAGTCCTCTAGCAGGTTGAGAGATTCATTACTTCCAAAAGATGAACCAAAGTTGGCAGTCCCCCTCTTACTGCTACTTGCTCAACATCGTTCTCTGGTTGTCATCAATGCAGACGCACCCTACATTAAGATGGTTAGCGAGCAGTTTGATAGATGCCATGGAATGCTTCTTCAGTACGTTGAATTTCTTGGCAGTGCAGTTTCACCAGCATCAAATTATGCTATTCTTATTCCCTCTCTCAGTGACCTGGTCCACCTTTACCACCTGGACCCAGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGGCTTTTCAAGTCTCATAGGAATCCTGATGTTTGCTGGCCCTTGGATGATAGAAGTGCTGCAAGTGATGTATCTTCAAACATTGAGTCTGACCTTGCAGATCATTCTGGTAGTATGGTTCTTGATCTTGGCTCTGGTCAAAGTCCTATAAGTTGGTCATATCTTCTAGATACTGTTAAAACCATGTTGCCTTCTAAAGCCTGGAATAGCCTTTCTCCTGACCTATATGCTACATTTTGGGGTCTCACATTATATGATCTGTATGTTCCGAAAAATCGTTATGAGTCGGAAATAACCAAGCTTCATGCTAATCTTAAGTCTTTGGAGGAGCTTTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGACTAGTGAACTCCACAAACATGAAGAGAATGTTGCATCTGTCCGTAGAAGGCTTTCTTATGAAAAAGACAAATGGTTAAGTTCCTGTCCTGATACCTTGAAGATTAACATGGAGTTTCTTCAGCGTTGTATATTCCCACGATGTACTTTCAGTATGCCGGATGCTGTTTATTGTGCTATGTTTGTGCACACACTTCATTCACTTGGAACCCCCTTTTTCAACACAGTCAACCACATAGATGTTCTGATTTGTAAGACCCTACAACCAATGATATGCTGCTGCACTGAATATGAGGTAGGCAGGCTTGGCAGGTTTCTGTACGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTACGAACGAGAATGTGGAAACATGCCTGGATTTGCTGTTTATTACAGATATCCTAATAGCCAGCGAGTTGCATATGGGCAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGTTTACTTATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACTAGAAAAAGTGGGATTAACCTTGAAAAGCGGGTAGCTAAGATTAAAGGTGATGAGAGAGAGGATCTTAAGGTGTTAGCAACTGGCGTTGCAGCTGCACTGGCTGCTAGGAAGCCTTCTTGGGTTACCGATGAAGAATTTGGTATGGGTTATCTTGAGCTGAAGCCTGCACCATCTATGACTAAATCTTCAGCTGGAACTTCGGTAACTGTACAAAGTGGGATAAGTCTTGGTGTTTCTCAAACTGAGTCTGCCAGTGGAAAACATTTGGACTCCGGAAACACAGTCAAAGACCAGATAACAAGAACAAAAACTGCAGATGGCAAGTCAGAGAGATCTGAAAGCATTACAGCAATGAAATCTGATTCTGGCCACGTAAAAATCAAGGGTAGTTCAATAGTGAATGGATTGGATGCTCAGTCATCCTTACCCTCATCTGCTGGACAATCTGGGACGTCAAAATCAGGGGAAACCCCAAAGCAAGTGGAAGAATCCATAATTAGAGCATCTGATGAACATGCGACAAGAACTGCTGAGTCGAGAACTTCAGCAAAACGTTCAGTGCCTGCTGGTTCACTTTCAAAGCCCTCAAAACAAGATCCTGCAAAAGAGGATGGAAGATCTGGAAAACCTGTTACTAGAGCTTCTGGCTCCATGAGCAGTGACAAGGATATACAACCCCATGCATCAGAGGGAAGACACACTGGAAATACCAATGCATCTTCTGCGAGCGCTAATGGTAACACCGTTTCAGGTTCTGCAAAAGCTCCATCAGCAAAGGTTTCATTTGATGGTCCTGGTAATGAATCAAAGGCAGATATCGGGGCTTCCAAGTCTTCCGATATTAGGGCTTCTATGGGGAAGGATGATGGAAATGATATTACTGACTTCACTAGAGGATCTTCTCGTGTAGTTCATTCCCCTAGGCATGAGAACACAGTCACTTCAAAGTCAAGTGATAAAAGTCAGAAGCGAGCTAGTTCTGCTGAAGAGCTAGACAGACTAGGTAAACGGCGGAAAGGGGATGTAGAGCTAAGAGATTTAGAGGGTGAAGCTCGTTTCTCTGAAAGAGAGAAGCTGATAGATCCTCGATTGGCTGATGACAAATTGGGACTTGATGAAATTGGTCTGTACAGGGCAGGAGATAAGCCATTGGAAAGGCCAAAAGACAAAGGTAGTGAAAGATACGAAAGGGAACACAGGGAAAGATTGGATCGTCTGGATAAGTCTCGTGGTGATGACTTTGTTGCAGAAAAACCTAGGGATAGGTCAATAGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATACAAGAGAGGGGTAGTGAGAGGAGTTTCAATAGACTCCCTGAGAAGGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAATTACGCTACAATGATGCAGTAGTAGAAAAGTCTCATGCGGATGACCGTTTCCATGGGCAAAGCTTGCCTCCGCCACCCCCTTTACCTCCGAATATGGTTCCTCAATCTGTTAGTGCTGGTAGGCGTGATGAAGATGCAGACAGGAGATATGCTACAAGGCATTCTCAAAGACTCTCTCCGAGGCATGAAGAAAAAGAACGGAGACGGTCTGAAGAGACTGTGGTTTCTCAGGATGATCCCAAACGTAGAAAAGAAGATGATTTTCGAGACCGAAAGCGTGAGGAAATGAAGGTGGAGGAGAGAGAAAGAGAGAGAGAAAGGGAGAAAGTCAACATTCTAAAAGAAGACTTGGATTTAAATGCTGCATCCAAGAGACGTAAGCTTAAGAGGGAGCATCTACCAACTGGTGAACCTGGGGAGTACTCACCGGTGGCCCCTCCTCCCCCTGGTATTGGTATAACACAAGCATATGATGGAAGAGACAGGGGAGACAGAAAAGGACCCATGATCCAGCATGCAAGTTACATAGATGAACCGGGTCTCAAGATTCACAGTAAAGAGGTAGCCGGCAAGATGAATCGTCGTGATTCAGATCCCTTGTATGACCGTGAATGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCACCGGAAGTAA 5601 0.431 MSFPAIERVYVTEDCVREWKTGNAALKVSEPVPMLRFLYELCWTMVRGELPLHKCKTALDSVIFSEKASPDKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESDLVPVRLLHERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKTSSTIGIIKSLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRFDEANKIGRINLAATGKDLMDEEKQGDVTIDLFAALDTETEAIEERMSELQDSQTLGLLTGFLAVDDWYHAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTGGSTDAMDVDNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVCRVLRGYYLSALELVNRGNGALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALVKSSSRLRDSLLPKDEPKLAVPLLLLLAQHRSLVVINADAPYIKMVSEQFDRCHGMLLQYVEFLGSAVSPASNYAILIPSLSDLVHLYHLDPEVAFLIYRPVMRLFKSHRNPDVCWPLDDRSAASDVSSNIESDLADHSGSMVLDLGSGQSPISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEITKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLTSELHKHEENVASVRRRLSYEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVAYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKGDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSMTKSSAGTSVTVQSGISLGVSQTESASGKHLDSGNTVKDQITRTKTADGKSERSESITAMKSDSGHVKIKGSSIVNGLDAQSSLPSSAGQSGTSKSGETPKQVEESIIRASDEHATRTAESRTSAKRSVPAGSLSKPSKQDPAKEDGRSGKPVTRASGSMSSDKDIQPHASEGRHTGNTNASSASANGNTVSGSAKAPSAKVSFDGPGNESKADIGASKSSDIRASMGKDDGNDITDFTRGSSRVVHSPRHENTVTSKSSDKSQKRASSAEELDRLGKRRKGDVELRDLEGEARFSEREKLIDPRLADDKLGLDEIGLYRAGDKPLERPKDKGSERYEREHRERLDRLDKSRGDDFVAEKPRDRSIERYGRERSVERIQERGSERSFNRLPEKAKDERSKDDRNKLRYNDAVVEKSHADDRFHGQSLPPPPPLPPNMVPQSVSAGRRDEDADRRYATRHSQRLSPRHEEKERRRSEETVVSQDDPKRRKEDDFRDRKREEMKVEEREREREREKVNILKEDLDLNAASKRRKLKREHLPTGEPGEYSPVAPPPPGIGITQAYDGRDRGDRKGPMIQHASYIDEPGLKIHSKEVAGKMNRRDSDPLYDREWDDEKRQRADQKRRHRK* 1867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1478 1493 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1318 1341 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1283 1299 - -
Lja4g0070 1866 Coils Coil 331 351 - -
Lja4g0070 1866 Pfam THO complex subunit 2 N-terminus 35 414 IPR032302 -
Lja4g0070 1866 Pfam THO complex subunit 2 N-terminus 445 589 IPR032302 -
Lja4g0070 1866 PANTHER THO2 PROTEIN 11 1775 IPR040007 GO:0000347|GO:0006397|GO:0006406
Lja4g0070 1866 Coils Coil 943 963 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1494 1662 - -
Lja4g0070 1866 Coils Coil 1734 1761 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1261 1282 - -
Lja4g0070 1866 Pfam Transcription- and export-related complex subunit 591 666 IPR021726 -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1345 1361 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1685 1781 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1824 1858 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1318 1866 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1394 1437 - -
Lja4g0070 1866 MobiDBLite consensus disorder prediction 1261 1305 - -
Lja4g0070 1866 Pfam Transcription factor/nuclear export subunit protein 2 920 1214 IPR021418 -
Lja4g0070 1866 Coils Coil 971 1005 - -
Lja4g0070 1866 PANTHER THO COMPLEX SUBUNIT 2 11 1775 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0070 4 557660 574619 Lja4g0070 4 557660 574619 ECH