Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4872 ATGGTTCTGGCCACATTTGTCTCAACCTTACTCCTAGCAGCATTAGCCTCCAAAATCATTGAATTCATAAGGTCATTTTCTTTGCACAAGAACAAGGACCTTCCTCCTGGTCCACCAAGGTGGCCTATAGTTGGAAACCTCCTCCAATTAAGTCAACTCCCTCATAGAGACTTAGCATCATTATGTGAAAAATATGGACCTTTAGTCTATTTAAAACTTGGCAAAATTGATGCTATTACCACTAATGACCCTGATATCATCCGTGAAATACTTCTCACCCAAGATGATGTTTTTGCCTCACGTCCACGCACTCTTGCTGCTGTTCATTTAGCATATGGGTGTGGTGATGTTGCATTAGCCCCTCTAGGACCGCATTGGAAACGCATGAGAAGGATTTGCATGGAGCATTTGTTAACAACAAAGAGGCTTGAATCCTTCTCAAGACATCGCCATGAGGAGGCCCAGCACCTTGTCCAGGGAGTTTGGGCTCAGGCCCAGACAGAAAAGCTCATTAACTTGAGGGAGGTTTTGGGTGCTTTCTCAATGAACAATGTCACTAGGATGTTGTTGGGGAAGCAGTATTTTGGCTCTGAATCTGCTGGTCCTCAGGAGGCTATGGAGTTCATGCACATTACACATGAGTTGTTTTGGTTGTTGGGTGTGATTTATTTGGGTGACTATTTGCCAGTGTGGAGGTGGGTGGATCCTTATGGGTGTGAGAAGAAAATGAGGGAAGTGGAGAAAAGAGTGGATGACTTTCATTCTAAAATTATTGAAGAGCATAGGAAAGCAAGGAAAGATAAGAAGGGGATAGGGAAAGGAGATGAAGAGATGGATTTTGTGGATGTTTTACTGTCCTTGCCAGGGGAAGATGGAAAAGAGCACATGGATGATGTAGAAATCAAAGCTTTGATTCAGGATATGATCGCTGCTGCAACAGACACTTCAGCTGTTACCAATGAATGGGCAATGGCAGAAGTAATCAAACACCCACGCGTTCTCCACAAAATCCAAGAGGAGCTCGACACCGTAGTTGGCCCCAACAGAATGGTCATAGAATCCGACTTGCCTCACCTCACTTACCTCCGATGCGTCGTGCGCGAAACATTCCGCATGCACCCAGCAGGGCCATTTCTCATTCCACACGAATCTCTTCGAGCCACCACCATCAACGGCTACCACATCCCAGCCAAGACACGCGTCTTCATCAACACGCACGGTTTGGGCCGGAACACGAAGTTATGGGACAATGTGGAGGAGTTCAGGCCCGAAAGGCACTTGCCGAGTGATGGGAGCAGAGTTGAGATCAGCCATGGCAGTGACTTCAAGATTCTGCCTTTCAGTGCTGGGAAGAGGAAGTGTCCTGGCGCACCGCTTGGTGTGAGTTTGGTCTTGATGGCTTTGGCTAGGCTCTTTCATTGCTTTGATTGGGAGCCAATTAAGGGTTTGAATCCTCAGGAGATTGATACTAGAGAAGTTTATGGAATGACTATGCCTAAGCTTCATCCCTTGATTGCAGTTGCTACACCACGTTTAGCAAAGAATATGTATAGTTGA 1557 0.4618 MVLATFVSTLLLAALASKIIEFIRSFSLHKNKDLPPGPPRWPIVGNLLQLSQLPHRDLASLCEKYGPLVYLKLGKIDAITTNDPDIIREILLTQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFSRHRHEEAQHLVQGVWAQAQTEKLINLREVLGAFSMNNVTRMLLGKQYFGSESAGPQEAMEFMHITHELFWLLGVIYLGDYLPVWRWVDPYGCEKKMREVEKRVDDFHSKIIEEHRKARKDKKGIGKGDEEMDFVDVLLSLPGEDGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRVLHKIQEELDTVVGPNRMVIESDLPHLTYLRCVVRETFRMHPAGPFLIPHESLRATTINGYHIPAKTRVFINTHGLGRNTKLWDNVEEFRPERHLPSDGSRVEISHGSDFKILPFSAGKRKCPGAPLGVSLVLMALARLFHCFDWEPIKGLNPQEIDTREVYGMTMPKLHPLIAVATPRLAKNMYS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4872 518 PANTHER CYTOCHROME P450 703A2-RELATED 10 517 - -
Lja3g4872 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Lja3g4872 518 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 10 517 - -
Lja3g4872 518 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4872 518 SUPERFAMILY Cytochrome P450 35 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4872 Lja-Chr3 90789947 90793263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4872 43 518 EF-hand Containing Proteins AT1G01280 78.378 0.0 776