Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3760 ATGTCCACCAAAGGGAAAGACATGGCAGAAGGATCATCTAGATCCTCTGCTTCCGGTGCGGGTGCTGATGCTGATGCTCGTGTTCGTGCTGTTGATGATGATCAACAACAACAAAAACAGTTGCCACTAAGCAGATATGAGTCTCAGAAGAAGAGAGACTGGAACACTTTTGGACAGTACTTGAGGAATCAAAGGCCACCTGTGGCACTTTCACAGTGCAATTCAAATCATGTGCTTGAATTTCTAAGGTACTTGGATCAGTTTGGGAAAACCAAAGTGCACTCACAAGGGTGTCTCTTCTTTGGACAAACGGAGCCACCTGGACCCTGCACCTGCCCTCTCAAACAAGCGTGGGGAAGCCTCGACGCGCTCATCGGAAGGTTACGAGCTGCCTACGAAGAAAACGGAGGTTTGCCGGAGACTAATCCCTTCGCCAGCGGTTCCATTAGAGTCCATCTACATGAGGTGAGGGACTTCCAAGCCAAAGCTAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATGTTATCAATCACAATGGAGACTCCTCATCAAACTTACCTATGCCGCCGTGA 579 0.4801 MSTKGKDMAEGSSRSSASGAGADADARVRAVDDDQQQQKQLPLSRYESQKKRDWNTFGQYLRNQRPPVALSQCNSNHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRVHLHEVRDFQAKARGIPYKKKKKKRNVINHNGDSSSNLPMPP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3760 192 MobiDBLite consensus disorder prediction 1 19 - -
Lja3g3760 192 MobiDBLite consensus disorder prediction 169 192 - -
Lja3g3760 192 ProSiteProfiles ALOG domain profile. 45 172 IPR006936 -
Lja3g3760 192 Pfam ALOG domain 37 158 IPR006936 -
Lja3g3760 192 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 190 - -
Lja3g3760 192 MobiDBLite consensus disorder prediction 1 50 - -
Lja3g3760 192 PANTHER PROTEIN G1-LIKE2 2 190 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3760 Lja-Chr3 74232998 74235522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3760 3 74232998 74235522 Lja3g4878 3 90853336 90855823 ECH
Lja3g2979 3 54781015 54781578 Lja3g3760 3 74232998 74235522 ECH
Lja3g3760 3 74232998 74235522 Lja6g2957 6 58508063 58513036 ECH
Lja3g3760 3 74232998 74235522 Lja4g0926 4 7868825 7874181 ECH
Lja3g3760 3 74232998 74235522 Lja3g3760 3 74232998 74235522 ECH