Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2979 ATGTCTACCAGCAGTGGCAATCATGGGAAGGATCTGGAACAAGGATCATCATCACTAGATCATTATCATCACCAGCACCAGCAGCAACAGCAGAGCGAACCCATCCCGCTTAGCCGCTATGAATCTCAGAAGAGAAGGGACTGGAACACATTCGGTCAGTACCTGAAAAACCAGAGACCTCCAGTCCCACTCTCCGAGTGCAACTGCAACCACGTCTTGGATTTCCTCCGTTACCTTGACCAGTTCGGGAAGACCAAGGTTCACCTGCAAGGTTGCATGTTCTACGGGCAGCCCGAACCCCCCGCGCGGTGCCCGTGCCCGTTGAGACAGGCTTGGGGGAGCCTTGATGCTCTCATAGGGAGGCTCAGAGCTGCTTATGAGGAAAACGGTGGGTCCCAAGATGCTAACCCTTTTGCAAGTGGTTCCATTCGTGTGTACCTTAGGGAGGTTAGAGAGAGCCAGGCGAAAGCGAGGGGTATTCCTTACAGGAAGAAAAAGAAGAACATGGATCAAAGCAACAAGGGGATTGGTGAAGAATCCAGCTCAAACATGCACTTCTCCTGA 564 0.523 MSTSSGNHGKDLEQGSSSLDHYHHQHQQQQQSEPIPLSRYESQKRRDWNTFGQYLKNQRPPVPLSECNCNHVLDFLRYLDQFGKTKVHLQGCMFYGQPEPPARCPCPLRQAWGSLDALIGRLRAAYEENGGSQDANPFASGSIRVYLREVRESQAKARGIPYRKKKKNMDQSNKGIGEESSSNMHFS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2979 187 MobiDBLite consensus disorder prediction 157 187 - -
Lja3g2979 187 MobiDBLite consensus disorder prediction 1 36 - -
Lja3g2979 187 PANTHER DUF640 FAMILY PROTEIN 6 187 - -
Lja3g2979 187 PANTHER PROTEIN G1-LIKE2 6 187 IPR040222 -
Lja3g2979 187 Pfam ALOG domain 28 152 IPR006936 -
Lja3g2979 187 MobiDBLite consensus disorder prediction 21 36 - -
Lja3g2979 187 ProSiteProfiles ALOG domain profile. 39 166 IPR006936 -
Lja3g2979 187 MobiDBLite consensus disorder prediction 157 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2979 Lja-Chr3 54781015 54781578 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2979 3 54781015 54781578 Lja3g3760 3 74232998 74235522 ECH
Lja3g2979 3 54781015 54781578 Lja3g4878 3 90853336 90855823 ECH
Lja3g2979 3 54781015 54781578 Lja3g2979 3 54781015 54781578 ECH
Lja3g2979 3 54781015 54781578 Lja6g2957 6 58508063 58513036 ECH
Lja3g2979 3 54781015 54781578 Lja4g0926 4 7868825 7874181 ECH
Lja3g2979 3 54781015 54781578 Lja3g2979 3 54781015 54781578 PCT
Lja3g4878 3 90853336 90855823 Lja3g2979 3 54781015 54781578 PCT