Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3502 ATGTGGCCTATATTAGTGGCTAACAAGATCCTCAACAAGCAAATTGGAAGCAGAAATTTCATAGCAGATTATCCAAGTTATGCAGAACCCTTATTGGGTATTACAAGCCATGATCACTCATCTCTGAGCACTAAAAGCATTCTTAATAATCACCAGGATTCACAGAAGTACAAGGTTTTTGTCAGCACATGGAATGTGGGTGGAATTTCACCAGACGAAGGATTGAATATGGATGATTTGTTGGAGACCTGCAACAAGCCTTTTGACATCTATGTCCTTGGGTTTCAAGAGATTGTGCCTCTAAAAGCAAAAAGTGTGTTGGGGTCTGAAAACAGCAAGATCTCTACAAAATGGAATTCTCTAATCAGAGAAGCTCTGAACAAGAGAACACATGATAATAAGGAAGGAAATCCAGCTCAGCAGTGTAGAGCCCCACAAGATTTTAATTGTATCATTAGCAAGCAAATGGTTGGTTTATTGGTATCTGTGTGGGTACGGAAAGACCTTCATCCATTCATTCAGCATCCATGTGTCTCATGTGTTGGCTGTGGCATCATGGGCTTCCTAGGCAACAAGGGTTCTGTATCTGTGAGATTTCTGTTACATGGAACAAGCTTCTGTTTTGTGTGCAGTCATCTGGCTTCTGGGGGAAGAGAGGGGGATGAGAAGTATAGAAACTCTAATGTTGGTGAAATATTTTCCAGGACAAGTTTTCATGTTAGGACCCCATTACAAGGTATGGGACTTGATCATGTGATATTGCTTGGAGATTTAAATTACAGAATTTCTCTGCCAGAAGAAACGACACGCTTACTTATTGAAAGAAGAGACTGGGATTCCCTATTAGAAAATGATCAGCTAAAAATGGAGCTAGTGAGTGGAAACCTGTTAAGAGGATGGCATGAAGGAGCAATTGAATTCGCCCCAACCTACAAGTATTGTCTTAATTCAGACCTGTACTATGGATGTTGTTACCATGCAAAGATGAAAGCAGCAAAGAAGAGATCACCAGCATGGTGTGACAGGATTATATGGTTTGGCAAGGGTTTAAAGCAAATTGAGTATGCTAGAAGTGAATCAAAACTGTCAGACCACAGGCCTGTGAAGGCATTGTTTACAGCACAAGTCAGGGATTCAGCAGCAATAAAAAACTTTCCAAGCTTGTTTCTATCAGAAAGATTTCAAAAAATTAAAACTCATCACTTTCAAGTTTCCCCCACTCATGATGAGTTTGTATGCCAAAAACAAGCAAGTTTCCACCGGTAA 1266 0.4021 MWPILVANKILNKQIGSRNFIADYPSYAEPLLGITSHDHSSLSTKSILNNHQDSQKYKVFVSTWNVGGISPDEGLNMDDLLETCNKPFDIYVLGFQEIVPLKAKSVLGSENSKISTKWNSLIREALNKRTHDNKEGNPAQQCRAPQDFNCIISKQMVGLLVSVWVRKDLHPFIQHPCVSCVGCGIMGFLGNKGSVSVRFLLHGTSFCFVCSHLASGGREGDEKYRNSNVGEIFSRTSFHVRTPLQGMGLDHVILLGDLNYRISLPEETTRLLIERRDWDSLLENDQLKMELVSGNLLRGWHEGAIEFAPTYKYCLNSDLYYGCCYHAKMKAAKKRSPAWCDRIIWFGKGLKQIEYARSESKLSDHRPVKALFTAQVRDSAAIKNFPSLFLSERFQKIKTHHFQVSPTHDEFVCQKQASFHR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3502 421 Gene3D Endonuclease/exonuclease/phosphatase 38 399 IPR036691 -
Lja2g3502 421 Pfam Endonuclease/Exonuclease/phosphatase family 63 365 IPR005135 GO:0003824
Lja2g3502 421 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 397 IPR045849 GO:0004445|GO:0046855
Lja2g3502 421 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 397 - -
Lja2g3502 421 SMART i5p_5 55 380 IPR000300 GO:0016791|GO:0046856
Lja2g3502 421 SUPERFAMILY DNase I-like 54 376 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3502 Lja-Chr2 82662713 82671323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3502 55 376 Acyl Lipid Metabolism Gene Families AT1G65580 30.423 3.44e-34 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3502 2 82662713 82671323 Lja2g3502 2 82662713 82671323 ECH