Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3500 ATGATGCTTGCCATTGGGAATCCTATCACTAGCATCCATACCAGCTCTACTTGCACTGCTTTGCTCAAAGAACTTGAGCAAATATGGAACGATATTGGGGAGAGTGAGAAGGAGAAAGATCGCATGTTATTTGAACTCGAGAGGGAATGCTTAGAAGTTTACAGGAGAAAGGTTGATGAGGCTGCCAACACCAAGGCGCGCTATCACCAGACTGTTGGAGCCAAGGAAGCAGAGCTTGCAACACTAATGGCTGCCCTTGGCGAACATGATATTCATTCGCCGATTAAAACAGAGAAGAAATCGGCATCCCTGAAGGAGAAGCTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAAGGATGAAAGGTTGAAGCAATTTGCAGATATTAAAGCTCAAATAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCCTGCCAATGATGCTGTGAGCAGCACAACAGTTGCGGAAGAACAGGACTTGTCACTAAGAAGGCTTAATGAATGTCAAACACATCTTCGTACTCTTCAAAAGGAAAAGTCCGACCGCCTTCAAAAGGTCTTGCAATGTGTGAATGAGGTGCATTCTCTCTGTGGTGTGCTTGGGTTGGATTTTGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGGGACTCAGTTGGAACAATCGACTAATATTAGCAATAGCACATTGGCAGGTCTAGAACAGACCATTGACAAATTGAAAACAGAAAGGAAAGCTAGAATGCAGAAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGAACTCACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGAAGGCTTCAGCAGAAGTAGAAAGGCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCAGAGCTAGAGGAAATTTGTAGACTGACTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGATTCTGGTCTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAGGCAAGAGATGAAGCTTTGAGCAGAAAAGAAGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTGGCTTGATGAATATAGTCAAGATAACAATCGGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGCGCTGAACGAGCTAGAGTAACTGTGACCAAAATTCCAGCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGGGAAGATGAAAAGAAGACTCATTTTCTATACGATGGGGTACGTTTGGTGTCAATATTGGAGGATTATAAACTGACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACAAGGACCAAAAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAAGCCATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGTTAGAAACACAAATGGGTATCGTGCAAATGGCAATGGGAATGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACTCTGTGAGTGGCGGAACATCTGAACTACTAACACCGCGTTCCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATGAGAAGGTTGTCCACTGCACCTCTCAACTATGTGGCTATATCTAAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTCAGAGCCTGAATCCCCTCCCCAAGTTTAA 1821 0.4234 MMLAIGNPITSIHTSSTCTALLKELEQIWNDIGESEKEKDRMLFELERECLEVYRRKVDEAANTKARYHQTVGAKEAELATLMAALGEHDIHSPIKTEKKSASLKEKLASVTPLVEELKKKKDERLKQFADIKAQIEKISGEIFESHPANDAVSSTTVAEEQDLSLRRLNECQTHLRTLQKEKSDRLQKVLQCVNEVHSLCGVLGLDFGQTVGDVHPSLHGTQLEQSTNISNSTLAGLEQTIDKLKTERKARMQKLKDVVAKLFDLWNLMDSSKEERNCFLRITSIVRISESELTERGVLSTEIIEKASAEVERLAKLKASRMKELVFKKRSELEEICRLTHIEPDTSTAPEKASALIDSGLVDPSELLANIEAQIMKARDEALSRKEVTDRIDKWLSACEEENWLDEYSQDNNRYSAGRGAHINLKRAERARVTVTKIPAMVDNLINKTLSWEDEKKTHFLYDGVRLVSILEDYKLTRHLKEEEKRRHKDQKKLQDLLLNQKEAMYGSKPSPRKSNSVRNTNGYRANGNGNGSVSSMPPTPRRNSVSGGTSELLTPRSYSGRHNGYFKEMRRLSTAPLNYVAISKEDTMSYSSHCGSEPESPPQV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3500 606 Coils Coil 472 501 - -
Lja2g3500 606 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 6 11 605 - -
Lja2g3500 606 MobiDBLite consensus disorder prediction 503 564 - -
Lja2g3500 606 Pfam Microtubule associated protein (MAP65/ASE1 family) 21 517 - -
Lja2g3500 606 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 605 IPR007145 GO:0000226|GO:0008017
Lja2g3500 606 Coils Coil 235 255 - -
Lja2g3500 606 Gene3D - 376 509 - -
Lja2g3500 606 MobiDBLite consensus disorder prediction 511 559 - -
Lja2g3500 606 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3500 Lja-Chr2 82510589 82516406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3500 16 562 EF-hand Containing Proteins AT5G62250 41.219 1.26e-114 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3500 2 82510589 82516406 Lja2g3500 2 82510589 82516406 ECH