Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3368 ATGAGGATTTGGAAAAAGGCCACCGGAGCTCTCAAAGACAGGTACAGCATTTTGGTCGCAAAGCTCTCACCGTACGGTCCTTGCCGGAACCCTGATCTTGAAACAGCGATCATCAAGGCCACGAGCCACGACGAACAGTTCATGGATTATAAGAACGTTCAGAGAGTTTTCCAATGGCTACGAATGTCACAGTTGTATCTGAAGCCTCTTTTGTACACTCTCTCTTTGAGATTGGAAAGGACTCGCAGCTGGGTGGTGGCACTCAAAGGGTTAATGCTCATTCATGGGTTGTTTTGCTTTGAACTACCAGCCGTGCATGTCATGGGAAGGTTGCCGTTTGATCTATCACATTTCAGTGATCGCCACATAAGCCCAGAAAATGCATGGTTTTTCAACGCCTTTGTTCGTTCATATTTTGCATATTTGGATCAAAGGTCAATACTAGCGCATTTGGAGGTGAAGAGAGAGAGCAAAAATGCCAAAACTGAACTGACATTGATGGAAGAGCTGAGGAATTTGGAGAAGTTGCAAGGGTTGACTGACAAGCTTCTACAAATCAAGCCCAGGAATAAGAATCACATGAATGTTGTCCTCATTCTTGAAGCCATGGATTGTGTTGTGGAGGAGGTTCTGGAAGTGTATGGTAAATTTAGCAAAGGGGTTGACAGAGTGTTGTTGAGAATATTTGATATTGGTGGGAAAGAAGAAGCAAGCGTTTTCCTTGATATTTTGGTCAAAGCTGAAGTGCAAGGTGGGAAGCTCTCTTTGTACTTTGATTTTTGTAAGGATATTGGGGTCCTCAGTGCCTCTCAGTGTCCTAAAATTGTGAGGATCCCTGAAAAGGACATTGAAGAGCTCCATAGAATGATAAATGGTGGAGAATCTGATGACAAGGCCATTGTTTTGGTTAGAGATTGCAGTGCCATTGCCACCATTTCTGAGCAGAAGGGTTTAAAAACTGTGATCACTGATCAATGGGAAGTATTTGATGATGATATAATAGTTGATGTTAACCAAAATGCCTCCTCCATTGTCCCAAGCGTTACGGCCATTAACCCTTTTGTGGAATCTTATAGTCTTGTCCCTTACTGTAATCCTGTTCACAATTATGATTTTCCAGATCTAATTAGTTTATAG 1137 0.4239 MRIWKKATGALKDRYSILVAKLSPYGPCRNPDLETAIIKATSHDEQFMDYKNVQRVFQWLRMSQLYLKPLLYTLSLRLERTRSWVVALKGLMLIHGLFCFELPAVHVMGRLPFDLSHFSDRHISPENAWFFNAFVRSYFAYLDQRSILAHLEVKRESKNAKTELTLMEELRNLEKLQGLTDKLLQIKPRNKNHMNVVLILEAMDCVVEEVLEVYGKFSKGVDRVLLRIFDIGGKEEASVFLDILVKAEVQGGKLSLYFDFCKDIGVLSASQCPKIVRIPEKDIEELHRMINGGESDDKAIVLVRDCSAIATISEQKGLKTVITDQWEVFDDDIIVDVNQNASSIVPSVTAINPFVESYSLVPYCNPVHNYDFPDLISL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3368 378 SUPERFAMILY GAT-like domain 163 291 - -
Lja2g3368 378 Gene3D ANTH domain 153 305 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lja2g3368 378 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 344 IPR045192 GO:0048268|GO:0072583
Lja2g3368 378 Pfam ANTH domain 32 290 IPR011417 GO:0005543
Lja2g3368 378 PANTHER OS08G0467300 PROTEIN 1 344 - -
Lja2g3368 378 SUPERFAMILY ENTH/VHS domain 32 147 IPR008942 -
Lja2g3368 378 Gene3D - 3 152 IPR008942 -
Lja2g3368 378 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lja2g3368 378 CDD ANTH_N_AP180_plant 33 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3368 Lja-Chr2 76858767 76860652 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3368 2 76858767 76860652 Lja2g3368 2 76858767 76860652 ECH