Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3360 ATGTCAACATTGACTGTACCTCCAATGTTGCATTCGCCTCGTGATGATGCTCGCAAGCTGCATAAAGCTTTCAAAGGTCTTGGCTGCGATACATCTAAGGTTATTCAAATCCTTGCTCATAGGGATTCCGTACAGCGCGACCTCATCCAACAAGAGTATGAAACTACCTTCTCTGAATCCCTTTCCAAACGTTTAGCTTCAGAGCTTCGCGGGCATACCAAGAAAGCACTGAAACTTTGGCTTTATGATCCTGCAACCCGGGATGCTGTGATAGCAAGGAAAGCCTTAACTACAACACCAGTTTTTGATAATCAAGCTATAACAGAAATAATATGTTCTCGTACCCCGTCGCAGCTAAGGCGATTGAAAGAAGTTTATCTGTCAACATACCATTCCTACATTGAGCATGACATTGAAAACCAAACAAGTGGTGATCACAAGAAGTTGTTGCTTGCATATCTAAGCACACCGCGTTATGAAGGCCCAGAATTGGACAATACAATAGTACAACAGGATGCCACACAGCTCTATAAATCAGGGGAGAAGAGGATAGGAACTGATGAGAAAATGTTCATAAAGATCTTCAGTGAAAGAAGCAGCACACATTTGGCTGCTGTTGACTCTGCTTACAGAGCTCAACATGGAAACACACTTGAAAAGGCACTAAAGAAAGAAACCTCTGGTAGTTTTTTGAGAGGCCTCTTGACCATACTACGTTGTGCTACTAACCCTGCTATGTACTTTGCTAAGATTTTGCACAAGTCAATGAAGGGTATGGGAACTGATGATAGTAGACTAATAAGGGTAATTGTGACCAGGACTGAGATTGACATGCAACACATAAAAGCAGCATATTATAGTAAATATGGAAAACCACTAACTCATGCTGTTCGTTCAGACACATCAGGCAGTTATAAAGACTTTCTATTACATCTTTTAGGCACTGATTATTAG 954 0.4119 MSTLTVPPMLHSPRDDARKLHKAFKGLGCDTSKVIQILAHRDSVQRDLIQQEYETTFSESLSKRLASELRGHTKKALKLWLYDPATRDAVIARKALTTTPVFDNQAITEIICSRTPSQLRRLKEVYLSTYHSYIEHDIENQTSGDHKKLLLAYLSTPRYEGPELDNTIVQQDATQLYKSGEKRIGTDEKMFIKIFSERSSTHLAAVDSAYRAQHGNTLEKALKKETSGSFLRGLLTILRCATNPAMYFAKILHKSMKGMGTDDSRLIRVIVTRTEIDMQHIKAAYYSKYGKPLTHAVRSDTSGSYKDFLLHLLGTDY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3360 317 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Gene3D Annexin 158 243 IPR037104 GO:0005509|GO:0005544
Lja2g3360 317 PANTHER ANNEXIN 8 317 - -
Lja2g3360 317 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 176 202 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 256 276 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 300 313 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 PRINTS Annexin family signature 93 114 IPR001464 GO:0005509|GO:0005544
Lja2g3360 317 ProSiteProfiles Annexin repeat profile. 83 155 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 SMART annex3 260 312 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 SMART annex3 185 237 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 SMART annex3 103 153 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 ProSitePatterns Annexin repeat signature. 260 312 IPR018252 GO:0005509|GO:0005544
Lja2g3360 317 ProSiteProfiles Annexin repeat profile. 243 314 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Gene3D Annexin 83 154 IPR037104 GO:0005509|GO:0005544
Lja2g3360 317 Gene3D Annexin 244 315 IPR037104 GO:0005509|GO:0005544
Lja2g3360 317 ProSiteProfiles Annexin repeat profile. 167 239 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Pfam Annexin 247 312 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Pfam Annexin 89 152 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Pfam Annexin 171 237 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 Pfam Annexin 16 78 IPR018502 GO:0005509|GO:0005544
Lja2g3360 317 PANTHER ANNEXIN 8 317 - -
Lja2g3360 317 SUPERFAMILY Annexin 2 316 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3360 Lja-Chr2 76443554 76446492 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3360 2 76443554 76446492 Lja2g3360 2 76443554 76446492 ECH