Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3354 ATGAGTGCGTTTGGCATCTCAGGTTTGGCACACTTGTTTGGGGTCTTGGCCATCATCCTCTTGCTTGTTTGGTTGTTGCATTACCGAGAAGGGATTGAGTTTGATTCGGACATTGGATTTCGCGTCTTCAATGTTCACCCTTTATTGATGTTCTTGGGATTTATTTTTCTTGCTGGTGAAGGTATGATGGCATTCCTAACGATTCCAGGCAAAAGGGAAGTGAGGAAGTTTGTTCATATGACACTCCATATCGTTGCTATTATTCTTGGTATTGTTGGTTTGTATGCCGTATTCAAGTTCCATGATATGGCACACATTGCGGATCTTTATAGCCTCCATTCATGGATTGGCATTGTCACCTTCGGCTTATTTGGTTTGCAGTGGCTTTTTGGTTTCGTGACGTTCATGCTTCCAGGGGCACAAGGTCCAACAAGAGCTACAATGCTTCCATGGCACAAAGCTGGTGGCAGAGCACTGTTGTTCATGGCAGTTTGTGCAGCAGAAACAGGATTAATGGAGAAGTCCAGATTCATAGGTCTAAAGCCATATCAAACAGAGATCAATTTGGTCAACTTCACAGGCCTTGCAATTCTATTGTTTGGAGTTTCTGTTAACATTGTTGTTGGTCTTCGTTAG 636 0.4308 MSAFGISGLAHLFGVLAIILLLVWLLHYREGIEFDSDIGFRVFNVHPLLMFLGFIFLAGEGMMAFLTIPGKREVRKFVHMTLHIVAIILGIVGLYAVFKFHDMAHIADLYSLHSWIGIVTFGLFGLQWLFGFVTFMLPGAQGPTRATMLPWHKAGGRALLFMAVCAAETGLMEKSRFIGLKPYQTEINLVNFTGLAILLFGVSVNIVVGLR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3354 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
Lja2g3354 211 CDD Cyt_b561_ACYB-1_like 36 177 - -
Lja2g3354 211 PANTHER CYTOCHROME B561-RELATED 2 210 IPR043205 GO:0016491
Lja2g3354 211 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 2 210 - -
Lja2g3354 211 SMART 561_7 45 171 IPR006593 -
Lja2g3354 211 Gene3D - 1 209 - -
Lja2g3354 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3354 Lja-Chr2 76150836 76156025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3354 9 210 Chloroplast and Mitochondria Gene Families AT1G14730 53.465 2.62e-76 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3354 2 76150836 76156025 Lja2g3354 2 76150836 76156025 ECH