Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3326 ATGTCTCTCTGCATCTTCTTCTTCTTCCATCTCTTCTTGTTGCTGTTCCTCTCCAATGCCCAACAAAACCAACAACTCTCATCCTTCAACATCTCACTCTCCCCATGGCTCCCTTCACAGAACAGAACCCTCCACTCCCCAAATTCCAAGTTCACTGCTGGCTTCTTCCCAGCATCACCCACTTCTCAAAACCTCTTCACTTTCTCTGTCTGGTTCTCCAGAGTCCCTAGAACTGCAAACCCTCTTGTTTGGAGTGCTAAAACCCAAGTCAACAGCTCTGGCTCCCTTGTAATCACCTCAAAAGGTGAGCTTCTTCTCCAAGGTTCAACTGTTAACCTTAATTCTTCTTCCAACTCCTCACAGCTAGTTCTTCAAGACAATGGAAACTTGGTGTTTGGGAGCTGGGAAAGCTTTGATAACCCAACCAACACAATCTTGCCAGCCCAGAACATCACTCATGTCAGGCTGAGATCTAACAATGGGAAATTCAAGTTCATTGCTGCCCAGTGTTTGGTTCTCAATGAAAATTCCACATGTGACTCTAATGATCAGTACTATAAAATCCAAAGTCCATTCCGGAGCATGGATGATGATGGGAAAATGACCATGGAAAGTAACTCTTTTCTCACTTCTGATTATGGTGACCCCAGGTTGAGGAAATTGGTTCTTGATGATGATGGGAATCTCAGAATCTACAGCTTCTACCCAGAGCAGGGTAACAAGTGGGTTGAGGTTTGGAGAGGGATATGGGAGATGTGCAAAATCAAAGGAAAGTGTGGAGCTAATGCTATCTGCATGCCCAGAGAGGAATATAACTCTACTTCTTGTCTTTGCCCATCTGGGTTCAAGCCAGTTCAAGGTGGAGCTGAAAAAGGTTGCACCTTGAAAATCCCTCTTTCAAGAAACACCATTTTTATCAGGCTGGACTATATAAACTACACCAGTGATGGCACTGTGAATCAAACCAATGCAGACAACTTCACAATCTGTGAATCCACCTGCAGAAGGGACCCAAAGTGTCTTGGATTTGGGTTCAAGTATGATGGATCAGGCTACTGTGCTCGGGTATTGGGAACACAGCTTCGGTATGGTCTCTGGTCACCAGGTTCTGAAACTGCCATGTTTGTGAAAGTGGACCAATCTGAATCAGAAGCCTCCAATTTCATTGGCTTGACCCAAGTGATGCAAACATCATGCCCTGTCAACATAAGCCTGCCACCGCCACCTAAAGACTCAAACACCACCGCCAGAAACATTGCCATAATCTGCACCCTTTTTGCTGCAGAGCTCATAGCTGGGGTGGCTTTCTTCTGGTCTTTTCTCAAGAGATACATCAAGTACAGAGACATGGCCACCACACTAGGCCTTGAGCTTCTACCTGCTGGTGGCCCCAAGAGGTTCAGTTACGCGGAGCTCAAAGCCGCAACCAATGACTTCTCCAACCTCATTGGCAGAGGAGGCTTTGGAGATGTCTACAAAGGGGTTTTGGCAGACAACCGCGTTGTCGCGGTGAAGTGCCTGAAGAATGTCACCGGCGGAGACGCTGAATTCTGGGCAGAGGTCACCATCATTGCCAGGATGCACCATCTCAACTTGGTTCGCTTGTGGGGTTTCTGTGCTGAGAAAGGACAAAGGATACTAATCTATGAATATATCCCTGGTGGATCACTGGACAAGTACTTGTTCCGGCATAGATCTGTGAAATTGAATGGTGAAACTGATCCAGATGTTGGCCCAACCTCACAAGGGAAGCCTGCATTGGATTGGCACATGAGGTACAGAATTGCTATGGGTGTGGCCAGGGCAATTGCATACTTACATGAGGAGTGTTTAGAGTGGGTTCTGCACTGTGACATCAAGCCTGAGAACATTCTATTAGGTGATGATTTTTGCCCTAAGATATCGGATTTCGGGCTCGCCAAGCTGAGGAAAAAGGAAGACATGGTGACCATGTCTAAGAGGAGGGGCACTCCTGGTTACATGGCTCCTGAATGGATCACTGCTGATCCAATCACCTCAAAAGCTGATGTGTTCAGCTTTGGCATGGTGCTGTTGGAGCTTGTGAGTGGGGTGAGGAACTTTGAGATCCATAGCTCTGAGGTGAAGAGTGAGGAGTGGTATTTCCCAGGGTGGGCTTTTGATAAGATGTTTAAGGAGATGAGATTGGATGACATTTTGGATAGTAAGATCAAAGAGGTTTATGACAGTAGGGTTCATTTTGAGTTTGTTAATAGGATGGTGATGACAGCAATGTGGTGCCTGCAGGAAAGGCCTGAGATGAGGCCAACCATGGGAAAAGTTGCTAAGATGTTGGAAGGGACTGCGGAGATCACTGAGCCCAAGAAGCCCACTGTTTTCTTCCTTGGGGAGGAGTAG 2376 0.4676 MSLCIFFFFHLFLLLFLSNAQQNQQLSSFNISLSPWLPSQNRTLHSPNSKFTAGFFPASPTSQNLFTFSVWFSRVPRTANPLVWSAKTQVNSSGSLVITSKGELLLQGSTVNLNSSSNSSQLVLQDNGNLVFGSWESFDNPTNTILPAQNITHVRLRSNNGKFKFIAAQCLVLNENSTCDSNDQYYKIQSPFRSMDDDGKMTMESNSFLTSDYGDPRLRKLVLDDDGNLRIYSFYPEQGNKWVEVWRGIWEMCKIKGKCGANAICMPREEYNSTSCLCPSGFKPVQGGAEKGCTLKIPLSRNTIFIRLDYINYTSDGTVNQTNADNFTICESTCRRDPKCLGFGFKYDGSGYCARVLGTQLRYGLWSPGSETAMFVKVDQSESEASNFIGLTQVMQTSCPVNISLPPPPKDSNTTARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFSYAELKAATNDFSNLIGRGGFGDVYKGVLADNRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILIYEYIPGGSLDKYLFRHRSVKLNGETDPDVGPTSQGKPALDWHMRYRIAMGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSKRRGTPGYMAPEWITADPITSKADVFSFGMVLLELVSGVRNFEIHSSEVKSEEWYFPGWAFDKMFKEMRLDDILDSKIKEVYDSRVHFEFVNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKPTVFFLGEE* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3326 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 152 IPR036426 -
Lja2g3326 791 ProSiteProfiles Bulb-type lectin domain profile. 29 145 IPR001480 -
Lja2g3326 791 PANTHER OS07G0415500 PROTEIN 4 791 - -
Lja2g3326 791 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Lja2g3326 791 PANTHER OS10G0101000 PROTEIN 4 791 - -
Lja2g3326 791 SMART blect_4 39 141 IPR001480 -
Lja2g3326 791 Gene3D - 36 145 IPR036426 -
Lja2g3326 791 SUPERFAMILY Protein kinase-like (PK-like) 460 772 IPR011009 -
Lja2g3326 791 Pfam Protein kinase domain 481 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g3326 791 SMART serkin_6 477 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g3326 791 PIRSF SRK 1 791 IPR024171 GO:0004674
Lja2g3326 791 Pfam D-mannose binding lectin 85 154 IPR001480 -
Lja2g3326 791 Gene3D Phosphorylase Kinase; domain 1 451 551 - -
Lja2g3326 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lja2g3326 791 ProSiteProfiles Protein kinase domain profile. 477 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g3326 791 Gene3D Transferase(Phosphotransferase) domain 1 552 784 - -
Lja2g3326 791 CDD STKc_IRAK 483 773 - -
Lja2g3326 791 Pfam S-locus glycoprotein domain 202 285 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3326 Lja-Chr2 75430791 75433569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3326 311 783 Receptor kinase-like Gene Family AT4G18250 33.401 9.50e-77 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja2g3326 Pkinase 7.7e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3326 2 75430791 75433569 Lja2g3326 2 75430791 75433569 ECH