Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3324 ATGATGGGGCCGCCGAATGGATTATCAAATGAAAGGAAACAAGATTGGCTTGGTGTTCTTATTAATAACAGCTTTGGCAATTGTGAAGATCATGAAGATGTTAAGTTTAATGAAAAGAATGTGTTCTGTGTGGACTGTGAAATTAGCTTATGCAGGCACTGTAAGGAAGCCCATTCCCTCCATCGAAGGTTCCAGATATACCGATATTGCTATCAAGATGTTGTTCGCCATTCTGATCTGCTCAAGTATTTTGACTGCTCCAACATTCAGACTTATATATCCAACAATGACAAGATTGTGCACCTCAAACCAAGGCCTTCAATCAAAGACATCAAACTAGGAAAAATATCAAAATCTGCTAATCAAGCCAAAGAAGCACAAACATCCACACCTCCTAAGTCTGGTGGTATTTGTAAAGAATGTGGAAAACATTTACAAGATGCGCGCAATCATTTCTGCTCCATTAAATGCAAGATCTCAGTGCTTCCAGTGGAACCCCAAAAGCAAGGAATTGCAGAACATTCTATGAATAAAAAGCAGTGTTCACAGAAGATTTCAGAGGAGCCTTTGAACCAAAATGATAACCAAAATTCAGAGAATGAGTCATCTATCTCTATAGCTGAGCCATATGAATGTGTTGAAATAGTGAACTTCAGAAAGAGGCCAAGGAAAAGCACCCCTCACATATCTCCTTTGATATGA 702 0.3889 MMGPPNGLSNERKQDWLGVLINNSFGNCEDHEDVKFNEKNVFCVDCEISLCRHCKEAHSLHRRFQIYRYCYQDVVRHSDLLKYFDCSNIQTYISNNDKIVHLKPRPSIKDIKLGKISKSANQAKEAQTSTPPKSGGICKECGKHLQDARNHFCSIKCKISVLPVEPQKQGIAEHSMNKKQCSQKISEEPLNQNDNQNSENESSISIAEPYECVEIVNFRKRPRKSTPHISPLI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3324 233 MobiDBLite consensus disorder prediction 172 205 - -
Lja2g3324 233 Pfam PLATZ transcription factor 68 159 IPR006734 -
Lja2g3324 233 ProSiteProfiles Zinc finger B-box type profile. 28 66 IPR000315 GO:0008270
Lja2g3324 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 230 - -
Lja2g3324 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 230 - -
Lja2g3324 233 MobiDBLite consensus disorder prediction 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3324 Lja-Chr2 75373385 75375477 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja2g3324 PLATZ 5.2e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3324 2 75373385 75375477 Lja2g3324 2 75373385 75375477 ECH