Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3319 ATGCCAACTAGATCCAAAACTTCCAAGCGGAAGCTCCACCAGGAGCCACCGTCGCACATCCTAAGCAAGAAGCTCCGGTCCAAACTGCCTCGCCGGCGACGACGTCAGATCTCGCCGGTGCTTCTATCCTCGCTGAGGCAGAAAACCTCTGGCGAGAATCCTCGGTTCTTCTCCGTCGTCTCAGTTGACTCGAGCTCCGGCTCCGACTTCGCCGGTGGCGAAGCTTCCTGCAATTCGAGCAGAGCTTCCAGCATATTCGCCGGAAAAGGAAGGACGAACTCGAGGAACGGATTATCTGAAGAAATTGACGACGTTCAGAACGTTGAGCGTGCGGATTTGCTGAGAAATCGGAGATTCGAGAAGCGGATCGAAAATGAAGCGGAGGTGTCAGAGTCTTCATGCGTGGACTCCAATTCTGGAGTTCAGGAACGCAGCAGAACCTTGATTTTGAAGTTCAGGAGCGGAAGAGAAAGTAACGATCCGAAGGTGAACGATGAAGTTTCCGAAGCTTGTACGAAATCGGAGATTACTTGTGCCGCCGCGGAGCAACATTCCGTTCAGCATTTGAAGTTCAGCAAAGGAAATTTGAACCGAAACGACTTCGTTTCGGTAAGCTCTGGTGTTCGCGCGACGTCGTTGGAGGAGAATAAGAACAGAGCATCGGAGTCCGAATTCTCTCAAGGTTCAAGGAGCCATCACGCTGGTGATAACTGCGCTGATTTGATATCGCAATCGATTCTGAAGTATGGATCGGATGATGATTCAGGCGCCGGTGATTCCGATCTTGCTTGCTCTGAGCAATTGCGATTCTCGTGCTGCGACGACGACGATGACGACGAAACGGTGTACTGCTCCAGCCAGGAAACTTCGTTCTCTGAACTTCACTCCGAGATCTTCGGCGAATCCTCAGAGATAGAGTTCTCAGATTACACTCCGTCACTGTTCGCCGATTCTGGAAGCCAGTTTTCCGAAGGATCCGTCGGAGAAACTCCTTCACCAACATACTCTCTGTTCGTTCAGTACCTCAACGAATTCTCAACTCTAGCTTCTCCGTTTAATGCTTCAATCGTCGAAGAAGATGCTTCTCTTCAGGACAAATTTGCAAGGTTTGAAGATTCTGATGACGAAGATAGTTACCAATTGCTGAGAAAGAGAGAAAGGAAGCAAGTGTTCCTGTGGAATTATGCTGAAGCGTATTTATCTGCCACAGAATTTGGAGAGCTCGTGCTTCAGCAACGCTCACAAATGGTTCACTGGATCATTGAGCAATCTTGTCAAAAACAGCTTCGACAAGAGACATTGTTTCTTGGAATCAGCCTGCTTGACCGATTCCTGGGCAAAGGATACTTCAAGGACAGACGAAACCTTCAAATTCTTGGAATTGCCTGCCTCACGCTAGCCACCAGGATTGAAGAAAACCAGCAATATAACAGACTGGGGCATAAAAATTTCAACATAGGAGACAGTGTATACAGTAGATGCGAGGTGGTAGCTATGGAATGGGTGGTGCAGGAGGTGCTCGAGTTCCAGTGTTTTCTGCCAACCATCTACAGTTTCTTGTGGTTCTATCTGAAAGCTGCTAATGCTGATTTAGTTGTGGAGAAAAGGGTCAAGTACCTTGCTGTACTGGCACTGTCAGCTAATGAGCAGCTGCGTTTCTGGCCCTCAACAGTTGCTGCTGCACTTGTAATCCTGGCTTGTCTAGAACTAGAACTCAATCAGAATGCATCCCATAAAGTCATAGGGATCCACGTTAGATCAAAGGATGAGAATTTGCATGAATGCATGGAGAGCCTGGAATGGTTGTTACGTTATCTATGA 1821 0.4811 MPTRSKTSKRKLHQEPPSHILSKKLRSKLPRRRRRQISPVLLSSLRQKTSGENPRFFSVVSVDSSSGSDFAGGEASCNSSRASSIFAGKGRTNSRNGLSEEIDDVQNVERADLLRNRRFEKRIENEAEVSESSCVDSNSGVQERSRTLILKFRSGRESNDPKVNDEVSEACTKSEITCAAAEQHSVQHLKFSKGNLNRNDFVSVSSGVRATSLEENKNRASESEFSQGSRSHHAGDNCADLISQSILKYGSDDDSGAGDSDLACSEQLRFSCCDDDDDDETVYCSSQETSFSELHSEIFGESSEIEFSDYTPSLFADSGSQFSEGSVGETPSPTYSLFVQYLNEFSTLASPFNASIVEEDASLQDKFARFEDSDDEDSYQLLRKRERKQVFLWNYAEAYLSATEFGELVLQQRSQMVHWIIEQSCQKQLRQETLFLGISLLDRFLGKGYFKDRRNLQILGIACLTLATRIEENQQYNRLGHKNFNIGDSVYSRCEVVAMEWVVQEVLEFQCFLPTIYSFLWFYLKAANADLVVEKRVKYLAVLALSANEQLRFWPSTVAAALVILACLELELNQNASHKVIGIHVRSKDENLHECMESLEWLLRYL* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3319 606 ProSitePatterns Cyclins signature. 413 444 IPR006671 -
Lja2g3319 606 MobiDBLite consensus disorder prediction 1 37 - -
Lja2g3319 606 Gene3D - 403 505 - -
Lja2g3319 606 PANTHER CYCLINS 8 597 IPR039361 -
Lja2g3319 606 PANTHER CYCLIN-SDS 8 597 - -
Lja2g3319 606 MobiDBLite consensus disorder prediction 212 234 - -
Lja2g3319 606 Pfam Cyclin, C-terminal domain 514 600 IPR004367 -
Lja2g3319 606 MobiDBLite consensus disorder prediction 8 22 - -
Lja2g3319 606 PIRSF Cyclin_A_B_D_E 77 268 IPR039361 -
Lja2g3319 606 PIRSF Cyclin_A_B_D_E 352 604 IPR039361 -
Lja2g3319 606 SMART cyclin_7 418 505 IPR013763 -
Lja2g3319 606 CDD CYCLIN 513 596 IPR013763 -
Lja2g3319 606 CDD CYCLIN 413 472 IPR013763 -
Lja2g3319 606 SUPERFAMILY Cyclin-like 373 510 IPR036915 -
Lja2g3319 606 SUPERFAMILY Cyclin-like 514 602 IPR036915 -
Lja2g3319 606 Pfam Cyclin, N-terminal domain 408 510 IPR006671 -
Lja2g3319 606 Gene3D - 506 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3319 Lja-Chr2 75280897 75285869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3319 413 602 Core Cell Cycle Gene Families AT5G25380 32.308 3.09e-22 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3319 2 75280897 75285869 Lja2g3319 2 75280897 75285869 ECH