Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3318 ATGGAGGGAAGCGAAATTGGAGAAAATGGAAGGAGAAAGGAGGTTGAGGGAAGTGATATTGTAGAGAAAGAAAATGAAGAGGATTTGAAGAAGATTATTGCAAGCCATCCTTTGTATGAAGTATTGATTGAATCTCACATGAACTGTTTGAAGGTAGGGTCTGAGGAAGCTGGAGAGTTTGATATCACAACTGATGCATGGAAGAATCTGATCAACTCAAATTCCAAAGCAACTAGTAGTCTAGAGCTAGACACTTCAGAGCTTGATCACTTCATGGAAGCATATTGCATGGCACTGAAGCAGCTCAAAGAAGCGATAGAGGGACCTGCAAAAGAAGCAAAAGCTTTCATTAATGCCACGTATATTCAAGTGAAGGAACTTAGTGACCCAACTAATCCAGAGCTTTTGATAAGCAGCAAGGACCTTGATGGTGGTTTCTCTCCTTAG 447 0.4094 MEGSEIGENGRRKEVEGSDIVEKENEEDLKKIIASHPLYEVLIESHMNCLKVGSEEAGEFDITTDAWKNLINSNSKATSSLELDTSELDHFMEAYCMALKQLKEAIEGPAKEAKAFINATYIQVKELSDPTNPELLISSKDLDGGFSP* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3318 148 SMART KNOX1_2 27 69 IPR005540 GO:0003677|GO:0005634
Lja2g3318 148 PANTHER FUSED COMPOUND LEAF 1 23 128 - -
Lja2g3318 148 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 23 128 - -
Lja2g3318 148 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Lja2g3318 148 MobiDBLite consensus disorder prediction 1 21 - -
Lja2g3318 148 SMART KNOX2_2 77 129 IPR005541 GO:0003677|GO:0005634
Lja2g3318 148 Pfam KNOX2 domain 86 127 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3318 Lja-Chr2 75250867 75252353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3318 27 127 Homeobox Transcription Factor Family AT4G08150 32.039 1.92e-10 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3318 2 75250867 75252353 Lja2g3318 2 75250867 75252353 ECH