Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3311 ATGGATGAAGGAACAGATTTTGCACTTGCCCAGTTGAGAAAGTCTGTTGAGAAGCTTGGTTCTTCTGCAGAGGGTTATGGGGACCCTACACTGATGAGGTTCTTGATTGCTCGATGTATGGATCCTGATAAAGCAGCTAAGATGTTTGTTCAATGGCGCAAATGGAGGGAAGCTATGGTGCATGATGGTTACATTCCAAGTTCTGAAGTTCAAGATGAATTGGAAACTAGAAAGATCTTTTTGCAGGGCTTGTCTCAGGAGAAATACCCTGTTATGATTGTCCAAGCAAAGAGGCATTTTCCTTCCAAGGATCAGCCACAATTCAAGAAATTCGTTGTATATCTACTGGACAAGACAATTGCGAGTGCTTTCAAAGGAAGGGAGATAGGAAACGAAAAGTTGATTGGGATTCTTGATCTGCAGAATCTTTCGTATAAAAACATTGATGCACGTGGGTTAATAACTGGATTTCAATTTTTACAGGCTTACTACCCGGAACGATTAGCAAAATGCTATATTTTGCATATGCCATGGTTTTTTGTGAGTGTTTGGAGAGTAGTTTCTCGCTTCCTAGAGAGGGCAACCCTTGAGAAGATTGTAATTGTAACCAATGAGGATGAGAGAAGCAAGTTTATAAGTGAGGTTGGTGAAGAGGTTCTCCCAGAAGAGTATGGTGGAAATGCAAAGCTTGTAGCTATACAAGATGTTGATTTGACACCACTAGAAAATGGAACAACAAATTAA 744 0.4032 MDEGTDFALAQLRKSVEKLGSSAEGYGDPTLMRFLIARCMDPDKAAKMFVQWRKWREAMVHDGYIPSSEVQDELETRKIFLQGLSQEKYPVMIVQAKRHFPSKDQPQFKKFVVYLLDKTIASAFKGREIGNEKLIGILDLQNLSYKNIDARGLITGFQFLQAYYPERLAKCYILHMPWFFVSVWRVVSRFLERATLEKIVIVTNEDERSKFISEVGEEVLPEEYGGNAKLVAIQDVDLTPLENGTTN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3311 247 Gene3D - 2 237 IPR036865 -
Lja2g3311 247 Pfam CRAL/TRIO domain 75 226 IPR001251 -
Lja2g3311 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Lja2g3311 247 SUPERFAMILY CRAL/TRIO N-terminal domain 7 65 IPR036273 -
Lja2g3311 247 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
Lja2g3311 247 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Lja2g3311 247 PANTHER OS03G0850700 PROTEIN 1 239 - -
Lja2g3311 247 CDD SEC14 80 227 IPR001251 -
Lja2g3311 247 SMART sec14_4 73 229 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3311 Lja-Chr2 75027814 75034976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3311 12 203 Acyl Lipid Metabolism Gene Families AT5G47730 23.786 8.66e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3311 2 75027814 75034976 Lja2g3311 2 75027814 75034976 ECH