Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3299 ATGGCTATCGAAACTCTAGTTCTTGGCGCTGGTCAAGAGGGAGGGAAGAGTTGCGTGGTGGTGACCATCAACGGGAAGCGAATCATGTTCGATTGCGGAATGCACATGGGCCTCTTGGACCACCGTCGATACCCTGATTTCTCTCTCATCTCCTCTCAAGGCCATTACGACGCTGCACTCTCCTGCATCATCATCACTCACTTTCACTTGGACCATGTTGGAGCATTGGCTTACTTCACCGAAGTTTGCGGGTATCGCGGTCCTATTTATATGACGTACCCAACTAAAGCTCTAGCTCCTTTGATGTTGGAAGACTATCGGAAGGTAATGGTTGATCGTCGGGGTGAGGAAGAGCTATTCACTTCAGAAAATATTGCAGAGTGCATCAAGAAAGTTATTGCTATAGATCTGAGGCAGACTGTGCAAGTAGATGAAGATCTGCAGATACGTGCATATTATGCAGGACATGTTATTGGAGCGGCAATGTTCTATGCAAAAGTTGGAGATGCAGAAATGGTTTATACAGGAGACTACAATATGACAGCAGATAGACACCTCGAAGCAGCTCAAATCGATAGATTACGGCTTGACCTTCTTATAACTGAATCCACGTATGCGACTACAATACGTGATTCAAAATATGCTCGTGAGAGGGAATTCCTCAAAGTCGTTCATAAATGTGTTTCTGGTGGAGGAAAGGTGCTTATTCCAACATTTGCTCTTGGTAGAGCTCAGGAATTATGCATTTTGTTGGATGACTACTGGGAGCGCATGAATTTGAAGGTTCCTATCTATTTCTCAGCAGGTTTAACTATTCAAGCTAATATGTACTACAAAATGCTTATTAGTTGGACAAGCCAGAAGATTAAAGATACATACTCTACACATAATGCATTTGATTTTAAGAATGTTCACCATTTTGAAAGGTCTATGATTAATGCTCCTGGTTCTTGTGTTCTCTTTGCCACTCCTGGGATGATAAGTGGTGGATTTTCACTTGAAGTTTTTAAGCACTGGGCACCGTCAGAAAATAACCTTATCACTTTGCCTGGGTATTGTGTAGCTGGGACAGTAGGACATAGATTAATGTCAGGTAAGGCCACCAAAGTTGATGTGGATCCTGAGACACAAATAGACGTGCGTTGCCAGATTCATCAATTGGCTTTTAGTCCTCACACAGATTCTAAAGGAATAATGGATCTTGTAAAATTTCTCTCCCCAAAGCATGTTATATTAGTGCATGGTGAGAAGCCTAAAATTGCTTTGCTTAAAGAGAAAATTCATTCTGAGTTGGGGATTCCGTGTCATGATCCTGCAAATCATGAAACCATATGCATTTCCTCCACTCCCTACGTAAAGACAGAAGCCTCTGGCACTTTCATTCAAAACTGCTTGAACCCGAACTTCAAATTCCAGAAATGCAGTTCAGTGGACGAATGTGACTCTACTTTGACAGAAAAAAACTTAATGCCTGAACTTCAAGTTAAAAACTGCTTGAATCCGAACTTCAAGTTCCAGAAATGCAGTTCAGTGGATGAATGTGACTCTACTTTGACAGAAAAAAACCTAATGCCTGAACTTCAAGTTAAAGATGAAAGAGTAGCAGAAGGAGTTCTGGTTATGGAGAAAACAAAAAAGGCAAAGATTGTTCACCAGGATGAACTTCTGCTCATGTTAGGTGAAAAGAAGCAAGGGGTTTAG 1701 0.4156 MAIETLVLGAGQEGGKSCVVVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAALSCIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELFTSENIAECIKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTADRHLEAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFDFKNVHHFERSMINAPGSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGHRLMSGKATKVDVDPETQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKIALLKEKIHSELGIPCHDPANHETICISSTPYVKTEASGTFIQNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKDERVAEGVLVMEKTKKAKIVHQDELLLMLGEKKQGV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3299 566 Pfam Beta-Casp domain 244 362 IPR022712 -
Lja2g3299 566 Gene3D - 212 390 - -
Lja2g3299 566 SMART Beta_Casp_2 244 362 IPR022712 -
Lja2g3299 566 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 1 564 - -
Lja2g3299 566 SUPERFAMILY Metallo-hydrolase/oxidoreductase 3 446 IPR036866 -
Lja2g3299 566 Pfam Metallo-beta-lactamase superfamily domain 21 191 IPR001279 -
Lja2g3299 566 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 1 564 - -
Lja2g3299 566 SMART Lactamase_B_5a 15 232 IPR001279 -
Lja2g3299 566 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 378 436 IPR011108 -
Lja2g3299 566 CDD INTS11-like_MBL-fold 6 203 IPR041897 -
Lja2g3299 566 Gene3D - 8 427 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3299 Lja-Chr2 74467115 74487416 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3299 2 74467115 74487416 Lja2g3299 2 74467115 74487416 ECH