Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3282 ATGGTTTGCTTGGTATCACGCTCCGGAAGGGAGTTGCAGAGGTACAACAGTGCTGGCGGCCGCCAAGTTGTAGGGTGCATACCTTACAGATATAAAGAAGATATTGAAGGTAATGTAAGCAATAAATTGGAGGTGCTTATGGTTAGTTCACAAAAAGGTCAAGCTTTGATGTTTCCCAAGGGTGGTTGGGAAGTTGATGAATCAGCAGAAGAAGCAGCTTGCAGGGAATCACTTGAAGAAGCAGGAGTTACAGGAACCATTGAGGATGGATTGGGCCAATGGAATTTCATTAGCAAAAGATATGGTACATACTATGAAGGGCACATGTTTCCCTTACTTGTGAAGGAGCAACTTGACCTATGGCCAGAGAAAACTCTACGGAGAAGAATATGGATGAACGTGGCTGAAGCTCGAGAAGTTTGTCACCATTGGTGGATGAAAGAAGCATTAGATATACTTGTTAGACGACTTACTCCACAGCAATATACGAACTTATAG 498 0.4317 MVCLVSRSGRELQRYNSAGGRQVVGCIPYRYKEDIEGNVSNKLEVLMVSSQKGQALMFPKGGWEVDESAEEAACRESLEEAGVTGTIEDGLGQWNFISKRYGTYYEGHMFPLLVKEQLDLWPEKTLRRRIWMNVAEAREVCHHWWMKEALDILVRRLTPQQYTNL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3282 165 Pfam NUDIX domain 43 148 IPR000086 -
Lja2g3282 165 CDD Nudix_Hydrolase_9 22 147 - -
Lja2g3282 165 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 164 - -
Lja2g3282 165 SUPERFAMILY Nudix 20 156 IPR015797 -
Lja2g3282 165 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Lja2g3282 165 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 164 - -
Lja2g3282 165 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Lja2g3282 165 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3282 Lja-Chr2 73495409 73497472 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3282 2 73495409 73497472 Lja2g3282 2 73495409 73497472 ECH