Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3279 ATGTCTTCACCGTCGCTGGCCACCGTCTCCGCCGTCTCCAACTCAACTCCGCCGTTCGACCGCGCCAAAGCCGTCAAGGAATTCGACGAGTCCAAGACCGGAGTCAAGGGCCTCATCGATTCCGGAATCAAGACCATCCCCTCTTTCTTCGTTCACCCGCCAGAAACCCTCTCCGACCTCAAACCCCGACCCGAATCCGATTCCAAACCCGAAATCCCAACCATCGACCTCGCCGCCGTGAACGAATCCCGCGCCGCTGTTGTGGATCAGATCCGCCGTGCGGCGAGCAGTGTTGGATTCTTCCAGGTGGTTAACCACGGCGTCCCGCTGGACCTCCTCCGCCGCACTGTTGCCGCCATCAAGGCGTTTCACGAGCAGCCGGAGGAGGAGAGGGCGCGGGTGTACACTAGGGAAATGGGCACGGGAGTGTCGTACATATCCAACGTGGATCTCTTCCAGTCAAAAGCTGCCAGCTGGCGCGACACACTGCAGCTTAGGATGGGGCCGACCGCAGTTGATCAAAGCATGATTCCAGAAGTTTGCAGGCAGGAGGTGATGGAGTGGGACAAGGAAGTGGTGCGGGTGGGAGAAGTTTTGTATGGTTTGCTAAGTGAAGGGTTGGGATTAGATGCGGGAAGGCTCAGCGAGATGGGTTTGGTGCAAGGGAGGGTGATGGTGGGTCACTATTACCCCTTTTGCCCTCAGCCTGATCTAACGGTGGGACTCAATTCTCATGCGGATCCAGGGGCGCTTACGGTGGTGCTGCAGGATCATATTGGTGGGTTGCAGGTTAGGACCACAGAGGGGTGGGTTGATGTCAAGCCTCTGGATGGAGCTTTGGTTATTAACATTGGAGATTTACTTCAGATAATTTCTAACGAGGAATATAAGAGTGCTGATCATAGGGTGTTAGCCAATTCTGCTAATGAGCCACGAGTCTCGGTGGCTGTTTTCCTCAACCCGGGTAACAGGGAGAAGCTGTTTGGACCTTTGCCAGAGCTAACATCAGCAGAGAAGCCAGCTCTTTATAGGAATTTCACTCTCGATGAATTCCTGACCAGATTCTTCAAGAAAGAGCTGGATGGTAAGTCATTGACAAATTACTTCAGGCAGTGA 1116 0.5421 MSSPSLATVSAVSNSTPPFDRAKAVKEFDESKTGVKGLIDSGIKTIPSFFVHPPETLSDLKPRPESDSKPEIPTIDLAAVNESRAAVVDQIRRAASSVGFFQVVNHGVPLDLLRRTVAAIKAFHEQPEEERARVYTREMGTGVSYISNVDLFQSKAASWRDTLQLRMGPTAVDQSMIPEVCRQEVMEWDKEVVRVGEVLYGLLSEGLGLDAGRLSEMGLVQGRVMVGHYYPFCPQPDLTVGLNSHADPGALTVVLQDHIGGLQVRTTEGWVDVKPLDGALVINIGDLLQIISNEEYKSADHRVLANSANEPRVSVAVFLNPGNREKLFGPLPELTSAEKPALYRNFTLDEFLTRFFKKELDGKSLTNYFRQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3279 371 Gene3D - 25 353 IPR027443 -
Lja2g3279 371 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 15 359 - -
Lja2g3279 371 Pfam 2OG-Fe(II) oxygenase superfamily 224 321 IPR044861 -
Lja2g3279 371 Pfam non-haem dioxygenase in morphine synthesis N-terminal 72 168 IPR026992 -
Lja2g3279 371 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 15 359 - -
Lja2g3279 371 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 321 IPR005123 -
Lja2g3279 371 SUPERFAMILY Clavaminate synthase-like 32 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3279 Lja-Chr2 73369794 73373156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3279 19 370 Glycosyltransferase AT5G59530 45.556 1.28e-104 310
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3279 2 73369794 73373156 Lja2g3279 2 73369794 73373156 ECH