Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1775 ATGGGTAACATGGGAGGAGGACTCTTCCCCCTCCTTTCATTGCAACCCCTCTCATTCATCATCCTCTTCTTCATCCTCTTTCTCTACATAACACTCACCGAGTTTCGACGAGTCAAAAAGCTTGCCGGATACCGTTCGAGCCCAGATGACTTAGGTCTGGACTCGGGTTCGGGTCCGGCAACATATCCCCTTATTGGGTGCTTAATATCCTTCTACAAGAACCGGTTCCGGCTTCTAGATTGGTATGCGGAGCTTCTGGCTCAGTCACCCACCAACACCATCGTGGTCCACCGCTTAGGCGCGCGGAGAACCGTAGTCACCTCCAACCCTCAAAACGTGGAGCACATTCTCAAGACAAACTTCCACAACTTTCCCAAAGGGAAGCCCTTCACGGACATCCTCAGCGACTTCCTCGGCCACGGCATCTTCAACGTGGACGGCGAACCGTGGCTCGCACAGCGCAAGCTCGCGAGCCACGTCTTCACCCCGCGGTCAGTCAGACAGTTCGTGACAACCACGCTGGAAGAAGAAGTGCGGGAGAACCTGCTGCCAGCGATGGAGGTGCTGGCGGAGGAGGAGAGGGTGGTTGACTTGCAAGAACTCTTAGGGAGATTCTCGTTCAGTGTGATTTGCAGGTTCACGCTCGGGAGTGATGTGTGTTGCTGTTTGGATCCGAGTTCTCCGATTTCACCGCTGACGAGGGCGTTTGATGTGGCGGCGGAGGTGTCGGCGAGGCGTGGTGCGGCGCCGTTGTTTTTGGTTTGGAAGGTGAAGAGGTGGCTAGGAGTTGGGTCGGAGAGGAGGCTCAAGGAGGCGGTTGAGGATGTTCATAGGCTTGTCATGAAAATGATTCAGGAGAGGAAGGTGGTTAAGATGAATGTAACAGGAGATGGAGATGAAGATGATGATGAAGATCTCTTGTCGAGGCTTATTTCTGCAGGTCACGAGGAAGAGGTGATCAGAGACATGTTGATAAGCTTCATCATGGCAGGGAGGGACACAACATCCGCAGCCATGACATGGTTCTTCTGGTTACTGTCACGTTACCCTAACACAGAGAACGACCTAGTCAAAGAGATAAAAAAATTCAAACCAAAAGAGACAACAACACTGAACTACGAATCACTGAAAGAATTAACATTCTTAAAAGCTTCCCTCAACGAGTGTATGAGACTGTATCCACCGGTTGCATGGGATTCCAAGCACGCCACGTGTGATGACACACTGCCAGATGGCACAAAGGTATTGGCAGGAGATAGAGTCACATATTTTCCTTATGGGATGGGGAGAATGGAAACGTTGTGGGGGAAGGATTGGTTTGAGTTTAGGCCTGATCGATGGTTTGTTGAAGAAGGGTTAGAGAAGAATGAAGGAGGGAGATTAATAATGCGTGAGGTTTGTCCATTCAAGTTTCCAATTTTTCAAGCTGGTCCAAGGGTTTGTCTTGGTAAGGAAATGGCTTTTGTTCAAATGAAGTATGTTGTGGCTTCCATTCTGAGCAGATTTGAAATTAGAGTTGTGAGTCCGGAGAAGCCTGTTTTTGTGCCGCTTCTCACGGCACACATGGCCGGCGGCTTAAAGGTCTTGCTTTCCAAAAGGGAATAA 1605 0.5003 MGNMGGGLFPLLSLQPLSFIILFFILFLYITLTEFRRVKKLAGYRSSPDDLGLDSGSGPATYPLIGCLISFYKNRFRLLDWYAELLAQSPTNTIVVHRLGARRTVVTSNPQNVEHILKTNFHNFPKGKPFTDILSDFLGHGIFNVDGEPWLAQRKLASHVFTPRSVRQFVTTTLEEEVRENLLPAMEVLAEEERVVDLQELLGRFSFSVICRFTLGSDVCCCLDPSSPISPLTRAFDVAAEVSARRGAAPLFLVWKVKRWLGVGSERRLKEAVEDVHRLVMKMIQERKVVKMNVTGDGDEDDDEDLLSRLISAGHEEEVIRDMLISFIMAGRDTTSAAMTWFFWLLSRYPNTENDLVKEIKKFKPKETTTLNYESLKELTFLKASLNECMRLYPPVAWDSKHATCDDTLPDGTKVLAGDRVTYFPYGMGRMETLWGKDWFEFRPDRWFVEEGLEKNEGGRLIMREVCPFKFPIFQAGPRVCLGKEMAFVQMKYVVASILSRFEIRVVSPEKPVFVPLLTAHMAGGLKVLLSKRE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1775 534 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 56 532 - -
Lja1g1775 534 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 SUPERFAMILY Cytochrome P450 58 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 Pfam Cytochrome P450 58 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1775 534 PANTHER CYTOCHROME P450 56 532 - -
Lja1g1775 534 Gene3D Cytochrome P450 54 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1775 Lja-Chr1 20044793 20048086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1775 56 534 Cytochrome P450 AT3G01900 59.499 0.0 573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1775 1 20044793 20048086 Lja1g1775 1 20044793 20048086 ECH
Lja4g0112 4 870811 871636 Lja1g1775 1 20044793 20048086 ECH