Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03898 ATGAGCCGGCCAATGGAGGAAGATACTGCGGGTAAGAATGAGGAAGAGGAGTTCAACACTGGACCACTATCTGTACTAATGATGAGTGTTAAAAATAATACCCAGGTATTGATAAATTGTCGAAACAACAAAAAGCTTCTGGGTCGTGTAAGAGCTTTTGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACTGAGGTGCCCAAGACTGGTAAAGGAAAGAAAAAGGCCCAGCCAGTGAACAAGGATAGATTCATCAGCAAAATGTTCCTCCGTGGAGATTCTGTCATAATTGTTCTTAGGAACCCCAAATGA 327 0.4281 MSRPMEEDTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03898 108 Gene3D - 16 108 - -
Lapu3g03898 108 MobiDBLite consensus disorder prediction 1 21 - -
Lapu3g03898 108 Pfam LSM domain 29 103 IPR001163 -
Lapu3g03898 108 ProSiteProfiles Sm domain profile. 23 108 IPR047575 GO:0003723
Lapu3g03898 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Lapu3g03898 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
Lapu3g03898 108 SMART Sm3 26 105 IPR001163 -
Lapu3g03898 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 2 108 IPR027248 GO:0008380|GO:0030532
Lapu3g03898 108 FunFam Small nuclear ribonucleoprotein Sm D2 16 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03898 Lapu-Chr3 62488439 62491454 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03898 3 62488439 62491454 Lapu3g03898 3 62488439 62491454 ECH