Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03891 ATGGACGAAGGGGTAGTTGAGAGGGCGCTGAACAGTTTAGGAAAAGGCTTCGACTTGACCTCAGATTTCAGGCTCAAGTACTGCAAAGGCGAAAAACGTTTGGTTCTTCTCAATGAAACCGAGAAACGAGAACTCGCGGTGCCAGGTTTCGGACGCATCAGCGATGTCTCCGGCGACATCAAATGCGACAAGGGCGATTGCACCCGCTACCAATCCGACATCCTCACCTTCAATCAAATGTCAGAGCTCTTCAACCAGAACAGTTCGATCCCTGGGAGAATCCCATCTGGGTTCTTCAACACCGTGTTTGGGTTTGATGAATGTTCGTGGGCAACTGATGCTGCTAACACCAAGTGTTTGGGTATTGATGGCTATTTTATCAAACTATTCAGTGTTCATATTGATCGGTACCCGCTTGTTCTGTCTCATCAAGTCCTTGAAGCTGTTCCTTCTTCCTGGGATCCCCCTGCACTTGCAAGATTCATTGAGAACTTCGGGACACACATCCTTGTGGGGCTTAGCATTGGTGGCAAAGATTTAGTGTTGGTCAAGCAAGACGTGTCTTCCAGCTTGGAGCCATCAGAGCTGAAGAAGCACTTGGATGAGCTTGGAAACCAATTATTCACTGGGACATGCAGTTTCCTTCCGAGGTCTAAAGACCAAAAATACAAGGTACCACAGGCTTTTGATGTCTTTGGTCCACAAATTGTCGCCTTCAATAGCTCTACATCCGTTTGTGCAAAAGATGGAATTACTGTGATATGTGCAAAGAGGGGAGGGGATACCCAAGTAAGCGACCATAGTGAATGGCTTCACACAGTTCCAAGGAAGCCAGATGCTGTTGATTTTAGCTTCATTCCCATCACTTCTCTTCTTAAAGGTGTTCCAGGCAAAGGCTTCCTATCCCATGCCATCAACCTCTACCTTCGATATAAACCCCCCATGTCAGATTTACCATACTTTCTTGACTACCAATCACACAAGCTTTGGGCTCCCGTTCACAATGATCTTCCACTGTGTCCAGCCACGAACAGAACCACCACTTCACCTTCGCTCAGTTTCAACTTGATGGGTCCCAAGCTTTATGTAAACACGTCAAAGGTAACAGTTGGTAAAAGGCCAATCACAGGGATGCGCTTGTTTCTTGAGGGCATGAAATGCAACAGATTAGCCATACACGTGCAACATCTATTGAACACTCCAATAATGCTTAACGACAGAATAGAGGACGCCCCAATATGGTCAGAAGAAATCACTGATGACCGTTTCTTTGAAGCAATCAATGGGAAGAAATTTTCACATGTATGTACAGCACCAATAAAGTACGACCCTAGATGGAGCTCTGATAAGGATGTGGCCTTTATAGTCACTGGAGCCCAAGTTCATGTAAAGAAACATGACTCCAGGAATGTCCTTCATCTGAGGTTGTTGTTCTCTCAGGTGTCTAATTGTGTAGTTGTAAAATCAAGTTGGACACAGGGCTCCTCTGGGTTATCACAGAGGTCTGGCATTTTCTCAGTAATAAGCTCATCAATTTCGGGCAAAGACCAGAAAAAACCAGTTGTAGTTTTGGACTCCAGTGTGTTTCCAACAGGACCTCCAATGCCAGTGCAAACACAAAAGCTGTTGAAATTTGTAGACACCTCACAGTTGTGTAAAGGTCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCGAGGTTGGTCTTGGACAAGGGTAAGATATGCTTATGGGCTAAGTTCTCTTTGTTAAACACTGGTTCGTGA 1770 0.4554 MDEGVVERALNSLGKGFDLTSDFRLKYCKGEKRLVLLNETEKRELAVPGFGRISDVSGDIKCDKGDCTRYQSDILTFNQMSELFNQNSSIPGRIPSGFFNTVFGFDECSWATDAANTKCLGIDGYFIKLFSVHIDRYPLVLSHQVLEAVPSSWDPPALARFIENFGTHILVGLSIGGKDLVLVKQDVSSSLEPSELKKHLDELGNQLFTGTCSFLPRSKDQKYKVPQAFDVFGPQIVAFNSSTSVCAKDGITVICAKRGGDTQVSDHSEWLHTVPRKPDAVDFSFIPITSLLKGVPGKGFLSHAINLYLRYKPPMSDLPYFLDYQSHKLWAPVHNDLPLCPATNRTTTSPSLSFNLMGPKLYVNTSKVTVGKRPITGMRLFLEGMKCNRLAIHVQHLLNTPIMLNDRIEDAPIWSEEITDDRFFEAINGKKFSHVCTAPIKYDPRWSSDKDVAFIVTGAQVHVKKHDSRNVLHLRLLFSQVSNCVVVKSSWTQGSSGLSQRSGIFSVISSSISGKDQKKPVVVLDSSVFPTGPPMPVQTQKLLKFVDTSQLCKGPQDSPGHWLVTGARLVLDKGKICLWAKFSLLNTGS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03891 589 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Lapu3g03891 589 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 586 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lapu3g03891 589 Pfam MAC/Perforin domain 99 308 IPR020864 -
Lapu3g03891 589 SMART MACPF_8 117 310 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03891 Lapu-Chr3 62427642 62434180 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03891 3 62427642 62434180 Lapu3g03891 3 62427642 62434180 ECH