Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03863 ATGCATCGTCCCCTTCTCCTCTTCCTCTTCCACCTCGCACTCTTCTCCTCCACCGCAACACCCTCCTCCTCCGCCGTCGACACCTTCATCTTCGGCGGTTGCTCCCAGCCCAAGTACACGCCCGGTTCGCCCTACGAGAGCACCGTCAACTCGCTCCTCACCTCGCTCATCAACTCCGCCGCGTTTGCCAACTACAACAACTTCACCGTCGCCGCTCCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAGCAACGACCAGTGCTCGCGCTGTGTGGCGCGTGCGGTCACTCAGCTCGGCACTCTCTGCTTCGCCTCCTGCGGCGGCGCGTTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAATGCGACGTTCGTCGGGGTTGAGGACAAGACGGTGGTGACCAAGAAATGTGGGCCGTCCGTTGGGTTGACATCGGACGCGTTGACTCGGAGGGACGCTGTGCTGGCGTATTTGCAGACGTCCGATGGGGGTTATAAGACCTTCAGAACCAGCGGGTATGGGGATTTTCAGGGTGTGGCGCAGTGCACCGGAGACTTGAGTCCCACCGAGTGCCAGGATTGTCTCTCGGGAGCCATCCAACGGCTCAAAACCGACTGTGGGCCCGCCCCCTGGGCAGAGATGTACCTCGCCAAGTGCTACGCGCGCTACTCCCAGAGTGGGTCTCACTCGCGCCCCAATAATAACGATGATAGCAACCACAATGATGATGAGATTGAGAAGACACTCGCTATACTAATTGGACTCATTGCCGGGGTTGCTCTGATCATCGTTTTCCTTTCTTTCTTGTCCAAAGTATGCGAAAAGCACAAAGGTGGTAAATAA 861 0.5854 MHRPLLLFLFHLALFSSTATPSSSAVDTFIFGGCSQPKYTPGSPYESTVNSLLTSLINSAAFANYNNFTVAAPSSDTVYGLFQCRGDLSNDQCSRCVARAVTQLGTLCFASCGGALQLDGCFVKYDNATFVGVEDKTVVTKKCGPSVGLTSDALTRRDAVLAYLQTSDGGYKTFRTSGYGDFQGVAQCTGDLSPTECQDCLSGAIQRLKTDCGPAPWAEMYLAKCYARYSQSGSHSRPNNNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03863 286 Gene3D - 26 130 IPR038408 -
Lapu3g03863 286 Gene3D - 150 232 IPR038408 -
Lapu3g03863 286 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Lapu3g03863 286 Pfam Salt stress response/antifungal 173 231 IPR002902 -
Lapu3g03863 286 FunFam Cysteine-rich repeat secretory protein 60 151 232 - -
Lapu3g03863 286 ProSiteProfiles Gnk2-homologous domain profile. 131 234 IPR002902 -
Lapu3g03863 286 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Lapu3g03863 286 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 279 - -
Lapu3g03863 286 FunFam cysteine-rich repeat secretory protein 3 26 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03863 Lapu-Chr3 62196758 62200225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03863 9 230 Receptor kinase-like Gene Family AT4G05200 26.809 9.54e-15 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03863 3 62196758 62200225 Lapu3g03863 3 62196758 62200225 ECH