Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03861 ATGGGCGATATGAAAGACAAGGTTAAAGGGTTCATGAAAAAAGTGAACAACCCTTTCTCCTCTTCGTCGTCTGGAAAATTCAAGGGCCAAGGTAGAGTCCTCGGTTCTTCTTCTACATCAGGCAATTCCAATCCTACCCCTCGCCCCATTCCTTCGCTCAATACTAATTCCAAACCCTTTTCAACCAATCCCAAGTTCACTCCAACCAATCCCAAACCTTCGCCCCACAATACGGAACCCAACAGAAGCACCGAGAAGCCTCGCAAAGATGGTGATGGGTTTGACCCGTTTGATTCTTTGGTCACTAATTCCAACAGATCGCAAAACGGGTATTCACTGAACGTCTATGAATGTCCCGTTTGTAAACAACCCTTCGGATCCGAAGAAGCTGTGTCTGAACACGTGGATGATTGTTTGAGTAACCTTGTTGAGCGTGAGCCTATAGTTGATGATGGAAGCGGGGTTTCAGAGACTGAGGTTGGGTCTAACAGTAATGGTGGATTGGAGGTTTGTGTTGGGACTTACATCTCAGGGAATCCATCTGAGGGATCGGTTGATATTGTTCTCAAACTGTTGAGGAATATCGTTAGGGAACCTGAGAATGTGAAGTTTAGGAGGATCAGGATGAATAATCCTAAGATAAAAGAGGCTGTTGGTGATGTTGCTGGGGGAGTTGAGTTGCTCAGTTTTCTGGGGTTTGAACTTGGGGAGGAGAATGGAGAGACGTTTGCAGTGATGGAGGTTCCCAGAGAGGAGCAGATAAAATTCATCAAGAAAGCAATTGCGTTACTGGAGTCACAAATTGTACAACAAGGACCTCCAAAGAGAGAGGATTCTGCGTCTGCGAATTCTGCGCAGACGGGTGCGAAGGCCGAACCAAAGCCAGTCGACAGACAGGTTAAGGTCTTCTTTGCCGTCCCTGAAAGTGTTGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAACCTTTCAGCAGAAGAGGTGAGAAGAGAAGCTGAATTAAGGAGAAAAAAGATTGCAGATTCTCAGCTTTTAATCCCCAAGTCACTTAAAGAAAAACAAGCAAAAGCTTACAGGAAGAGATACACAAAAACTATTATTAGGATTCAATTTCCAGATGGAGTTGTACTACAAGCTGTATTTGCTCCATGGGAACCAACCACCACTCTCTATGAGTTTGTGAGCTCAGCACTAAAAGAACCAGGTTTGGAATTTGAGCTAATGCATCCTGTAATTGTCCAACGGCGTGTGATACCTCATTTTCCAAAAGCAGGGGAAAATGCCAAAACAATAGAGGAAGAGGACCTGGTACCTTCGGCTCTAATTAAGTTCAAGCCCTTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCACTTGTAAATGGTTAA 1416 0.4414 MGDMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSTSGNSNPTPRPIPSLNTNSKPFSTNPKFTPTNPKPSPHNTEPNRSTEKPRKDGDGFDPFDSLVTNSNRSQNGYSLNVYECPVCKQPFGSEEAVSEHVDDCLSNLVEREPIVDDGSGVSETEVGSNSNGGLEVCVGTYISGNPSEGSVDIVLKLLRNIVREPENVKFRRIRMNNPKIKEAVGDVAGGVELLSFLGFELGEENGETFAVMEVPREEQIKFIKKAIALLESQIVQQGPPKREDSASANSAQTGAKAEPKPVDRQVKVFFAVPESVAAKIELPDSFYNLSAEEVRREAELRRKKIADSQLLIPKSLKEKQAKAYRKRYTKTIIRIQFPDGVVLQAVFAPWEPTTTLYEFVSSALKEPGLEFELMHPVIVQRRVIPHFPKAGENAKTIEEEDLVPSALIKFKPLETDSVVFTGLKNELLEISEPLVNG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03861 471 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 470 - -
Lapu3g03861 471 FunFam UBX domain-containing protein 6 354 445 - -
Lapu3g03861 471 Pfam PUB domain 182 256 IPR018997 -
Lapu3g03861 471 CDD PUB 181 266 - -
Lapu3g03861 471 ProSiteProfiles UBX domain profile. 360 444 IPR001012 GO:0005515
Lapu3g03861 471 Pfam UBX domain 361 411 IPR001012 GO:0005515
Lapu3g03861 471 MobiDBLite consensus disorder prediction 271 293 - -
Lapu3g03861 471 Gene3D - 354 447 - -
Lapu3g03861 471 MobiDBLite consensus disorder prediction 1 108 - -
Lapu3g03861 471 MobiDBLite consensus disorder prediction 272 288 - -
Lapu3g03861 471 MobiDBLite consensus disorder prediction 79 95 - -
Lapu3g03861 471 SMART PGNneu 183 250 - -
Lapu3g03861 471 SUPERFAMILY Ubiquitin-like 332 444 IPR029071 -
Lapu3g03861 471 SUPERFAMILY PUG domain-like 180 266 IPR036339 -
Lapu3g03861 471 MobiDBLite consensus disorder prediction 15 65 - -
Lapu3g03861 471 Gene3D - 178 266 - -
Lapu3g03861 471 Gene3D Classic Zinc Finger 112 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03861 Lapu-Chr3 62182478 62186858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03861 1 392 C2H2 Transcription Factor Family AT2G01650 53.186 6.54e-139 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03861 3 62182478 62186858 Lapu3g03861 3 62182478 62186858 ECH