Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02666 ATGCCCATACATACCCTATTTTTTAGCACCCTTTCTCTCTCCCCATTCCTATTGCTACTCTCTTCTCTCTCCTCTCTCTTCGCCTTTCTCTTTCTCTCTCTTTCAGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACAAAGCCATATTTGCCTGCTCGTGATCCAGCTGTGTTAATGGGCGCAAATGGAACTTTTCACCCTCGAGATTGCGTTGTTTCCGAAGCACCAATGCAGTTGAACTATGTCAGAGATAATTGGACAAGCCAGAGGGATAGGTATTTCAATATCCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGTAGCTCCCAACTTGCAAATTATACAACCACCCGATACATCGAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGCCAGTCAAAGAAAAGGCAAACTAAGGGTGCTCTGACGACTCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATAGCAATGTTCCTGTTCAACGTGTGAAGCCGCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGACTACCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGTTATCGTTGGGGTTGTGGAGGTTGGCAATCGGCTTGTTGCACCACAAATGTGTCCATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGAATAGCTGGGAGGAAAATGAGCCAAGGTGCTTTCAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTTACTATCAGGTAG 1017 0.4464 MPIHTLFFSTLSLSPFLLLLSSLSSLFAFLFLSLSDFCLSHLSLSGRANPKDRLHPPIVMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPAVLMGANGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFNIQQPTNPNYAVLPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNSNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02666 338 Pfam GAGA binding protein-like family 60 338 IPR010409 -
Lapu3g02666 338 MobiDBLite consensus disorder prediction 186 226 - -
Lapu3g02666 338 SMART GAGA_bind_2 60 338 IPR010409 -
Lapu3g02666 338 PANTHER - 60 338 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02666 Lapu-Chr3 49228716 49230369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02666 60 338 BBR or BPC Transcription factor family AT2G01930 55.705 4.49e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lapu3g02666 GAGA_bind 3e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02666 3 49228716 49230369 Lapu3g02666 3 49228716 49230369 ECH