Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01727 ATGGGAGGGGGTCACATGGGGTGGTTCCTCTTTTGTTCTTCTTCTCTGCTTTTTTTTGCTGCCATGGCTTCATCTGGGTCAGTCGCAAACTTGCCCATCATAGCCTTTGAGGATGGCTACACCCCCTTGTTTGGGGACCATAATTTGGTCATCCACAGAGATGGCAAGTCAGTTCACCTTTCACTTGATGAAAGAACAGGTTCTGGATTTGCGTCTCATGACCTTTACCTTCATGGCTACTTCAGTGCCTCGATTAAGTTGCCTTCTGATTACACAGCTGGAGTTGTGGTTGCATTTTATATGTCAAATGGTGACATGTTCCAGAAGAACCATGATGAGATAGACTTTGAATTTTTGGGGAACATTAGAGGCAAAGACTGGAGGGTTCAGACCAATGTTTATGGCAATGGAAGTACCAACATTGGTAGAGAGGAAAGATATGGCCTATGGTTTGATCCTGCTGAGGATTTCCATCAGTACAGTATTCTCTGGACTGATTCTAAGATCATATTTTTGGTGGATGATGTTCCTATTAGGGAACTTAAGAGAACAGAATCTATGGGAGGAGATTTCCCCTCAAAGCCAATGACTTTGTATGCCACCATATGGGATGCATCTGATTGGGCCACCAATGGAGGCAAATATAGAGTAAATTACAAGTACGCACCCTATGTTGCTGAGTTCTCAGACCTTGTCCTGCATGGTTGTGCAGTTGATCCCATTGAGCATGTGACCAAGTGTGACACTAGTGGCCAAGATTCTGAGGCAGTTTCTTCTGGTATCACCCCCTTACAAAGAACCAAAATGAGCAACTTCAGGTTGAAGCACATGACATACTCTTACTGCTATGACACTGTTAGATACAAAGTCCCTCCACCAGAGTGTGTCATCAAACCCCAAGAAGCTGAAAGGCTTAGAAAATTTGATCCAGTCACGTTTGGCAATGGCCGGAGCCACCGGGGAAAACGACACCACCGTAGTAGAGGTGGCCAAGAAGAAGCTGCTTCTTCATTTTAA 1017 0.4474 MGGGHMGWFLFCSSSLLFFAAMASSGSVANLPIIAFEDGYTPLFGDHNLVIHRDGKSVHLSLDERTGSGFASHDLYLHGYFSASIKLPSDYTAGVVVAFYMSNGDMFQKNHDEIDFEFLGNIRGKDWRVQTNVYGNGSTNIGREERYGLWFDPAEDFHQYSILWTDSKIIFLVDDVPIRELKRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDLVLHGCAVDPIEHVTKCDTSGQDSEAVSSGITPLQRTKMSNFRLKHMTYSYCYDTVRYKVPPPECVIKPQEAERLRKFDPVTFGNGRSHRGKRHHRSRGGQEEAASSF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01727 338 Gene3D - 22 295 - -
Lapu2g01727 338 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Lapu2g01727 338 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 228 IPR000757 GO:0004553|GO:0005975
Lapu2g01727 338 PIRSF EndGlu_transf 4 300 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lapu2g01727 338 MobiDBLite consensus disorder prediction 308 338 - -
Lapu2g01727 338 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 258 295 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Lapu2g01727 338 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 29 295 IPR044791 GO:0004553
Lapu2g01727 338 FunFam Xyloglucan endotransglucosylase/hydrolase 23 297 - -
Lapu2g01727 338 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 298 IPR013320 -
Lapu2g01727 338 CDD GH16_XET 34 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01727 Lapu-Chr2 31001748 31005462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01727 16 328 Glycoside Hydrolase AT2G01850 68.790 7.76e-166 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01727 2 31001748 31005462 Lapu2g01727 2 31001748 31005462 ECH