Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01711 ATGTCGGCCACTTTGGACCATGCTGGTCAAAGAGCTGAAGCTATTCCCCAATCCACAGCAACACCAAATTGGACTATTCATGTATCAGATATAAGAACAGTTAAGGTTAGCAACATATCAGTGGTTACTTCCAAGACGGAGATTCAAGAATTCTTTTCATTCTCAGGTGATATTCGGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAGGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTCTTAACGGGTTCGAAGATAGGTGATCTGTATGTCACCATCACACCTGTGGAGAAGTATCAACTGCCCCCTGATGCTCTTCCAGCAAGTCCGACAAACCAAAGTGCTGATGCAGTAAAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCTATCAACAAGGCAAAATCCTTTGATGAGCGTCACCAGTTGAGCTCAAATGCTTCTTCCACAGTTGCTTCCATTGATCGTAGAATGGGTTTCAGTGACAAACTAAGTGTCGGGACAGCTATTGTGAATGGAAAGGTGAGAGAGATGGATGAAAAGTATCAGCTTTCTGAAATAACAAAGTCTGCTATTGCTGCTGCAGAGCAAAAGGCAAGCAGTGCTGGATCTGTTATCATGAGCAATCCTTATGTTTTAACTGGAGCTTCATGGGTGTCTAGTGCCTTTACTGCCATAGCAAAGGCAGCCGGGGATGTCAGCACGATGACAAAGGAGAAGGTTGAACAGGCCGAGGAGGAAAGGAAAGAGATCATTTATAGTGAAAGGAAAGGGACTGTTGATGAATTTGCAAAGAAACACTTTCAGGATGCTTCGGACATGGGCCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTGGAAATTATATAA 930 0.4333 MSATLDHAGQRAEAIPQSTATPNWTIHVSDIRTVKVSNISVVTSKTEIQEFFSFSGDIRYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTITPVEKYQLPPDALPASPTNQSADAVKKAEDVMSTMLAKGFILGKDAINKAKSFDERHQLSSNASSTVASIDRRMGFSDKLSVGTAIVNGKVREMDEKYQLSEITKSAIAAAEQKASSAGSVIMSNPYVLTGASWVSSAFTAIAKAAGDVSTMTKEKVEQAEEERKEIIYSERKGTVDEFAKKHFQDASDMGPAIVPVNSHDDHKLEII* 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01711 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Lapu2g01711 309 Gene3D - 28 102 IPR012677 -
Lapu2g01711 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 96 IPR000504 GO:0003723
Lapu2g01711 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Lapu2g01711 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 31 264 - -
Lapu2g01711 309 SUPERFAMILY RNA-binding domain, RBD 21 108 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu2g01711 Lapu-Chr2 30861054 30864919 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01711 2 30861054 30864919 Lapu2g01711 2 30861054 30864919 ECH